RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 H0YHG0 523 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 MYL12BO14950 172 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 CASQ2O14958 399 aaPredicted RBP12.86□□□□□ -0.35
MBD3-206ENST00000589901 CDRT1O95170 752 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 HTR3BO95264 441 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 RAB7AP51149 207 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 PAX5Q02548 391 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 Q8NFD4 153 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 OR51D1Q8NGF3 324 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 OR10X1Q8NGY0 326 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 CHPT1Q8WUD6 406 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
MBD3-206ENST00000589901 RYR3Q15413 4870 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 FGF16O43320 207 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 LIMS3P0CW19 117 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 LIMS4P0CW20 117 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 REG1BP48304 166 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 KCNJ3P48549 501 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 TAS2R43P59537 309 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
MBD3-206ENST00000589901 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 ASCL4Q6XD76 172 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 OR52N1Q8NH53 320 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 S100A13Q99584 98 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
MBD3-206ENST00000589901 CNOT2Q9NZN8 540 aaKnown RBP12.85□□□□□ -0.35
MBD3-206ENST00000589901 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
MBD3-206ENST00000589901 IGHV3-72A0A0B4J1Y9 119 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 NUDT19A8MXV4 375 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 HSD17B6O14756 317 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 OR7C1O76099 320 aaPredicted RBP12.84□□□□□ -0.35
MBD3-206ENST00000589901 IGHG2P01859 326 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 ETV1P50549 477 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 FAM53AQ6NSI3 398 aaPredicted RBP12.84□□□□□ -0.35
MBD3-206ENST00000589901 SLC16A12Q6ZSM3 486 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 SLC35E3Q7Z769 313 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 MOB3BQ86TA1 216 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 KLHL30-AS1Q8NEE0 82 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 UBALD1Q8TB05 177 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 DPF1Q92782 380 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 DUX3Q96PT4 197 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 ING4Q9UNL4 249 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 ERGIC3Q9Y282 383 aa12.84□□□□□ -0.35
MBD3-206ENST00000589901 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 ERICH4A6NGS2 130 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 CCRL2O00421 344 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 MYCNOSP40205 109 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 ZNF816Q0VGE8 651 aaPredicted RBP12.83□□□□□ -0.36
MBD3-206ENST00000589901 ST3GAL4Q11206 333 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 EBI3Q14213 229 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 OR2G6Q5TZ20 316 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 STPG2Q8N412 459 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 BPIFB6Q8NFQ5 453 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 THRSPQ92748 146 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 TMEM106AQ96A25 262 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 ORAI1Q96D31 301 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 SMIM19Q96E16 107 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 EAF1Q96JC9 268 aaPredicted RBP12.83□□□□□ -0.36
MBD3-206ENST00000589901 P2RX4Q99571 388 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 GPR61Q9BZJ8 451 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 IFT22Q9H7X7 185 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 ZFP57Q9NU63 452 aa12.83□□□□□ -0.36
MBD3-206ENST00000589901 NCBP2LA6PVI3 153 aaKnown RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 C15orf65H3BRN8 121 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 GEMIN2O14893 280 aaKnown RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 GZMHP20718 246 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 RBM11P57052 281 aaKnown RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 SLC35B1P78383 322 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 CD69Q07108 199 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 YIF1BQ5BJH7 314 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 NHLRC3Q5JS37 347 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 AHSA2Q719I0 299 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 FOXRED2Q8IWF2 684 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 ARL11Q969Q4 196 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 RBMXL1Q96E39 390 aaKnown RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 MCRIP2Q9BUT9 160 aaKnown RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 METTL9Q9H1A3 318 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 TMEM138Q9NPI0 162 aa12.82□□□□□ -0.36
MBD3-206ENST00000589901 SIRT4Q9Y6E7 314 aaPredicted RBP12.82□□□□□ -0.36
MBD3-206ENST00000589901 IGHV3-43A0A0B4J1X8 118 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 TMEM30CPA0ZSE6 113 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
MBD3-206ENST00000589901 IGHV3-43DP0DP04 118 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 SERPINA2P20848 420 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 SLC6A1P30531 599 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 ZNF93P35789 620 aaPredicted RBP12.81□□□□□ -0.36
MBD3-206ENST00000589901 GPR12P47775 334 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 DDI2Q5TDH0 399 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 LCNL1Q6ZST4 164 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 ZNF695Q8IW36 515 aa12.81□□□□□ -0.36
MBD3-206ENST00000589901 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms