RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PPIAL4FP0DN26 164 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 AADACP22760 399 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 NFYAP23511 347 aaPredicted RBP9.52□□□□□ -0.88
SMAD4-205ENST00000588745 ZBTB25P24278 435 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 HERV-K104P61576 105 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 CD83Q01151 205 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 PPP1R1AQ13522 171 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 EDDM3AQ14507 147 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 C6orf183Q5T699 404 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 LYG2Q86SG7 212 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 MUC20Q8N307 709 aaPredicted RBP9.52□□□□□ -0.88
SMAD4-205ENST00000588745 ZNRF1Q8ND25 227 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 CCL17Q92583 94 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 TOMM40LQ969M1 308 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 TMEM230Q96A57 120 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 KIRREL1Q96J84 757 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 RTBDNQ9BSG5 229 aaPredicted RBP9.52□□□□□ -0.88
SMAD4-205ENST00000588745 TMPRSS13Q9BYE2 586 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 ZNF665Q9H7R5 613 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 TAF9BQ9HBM6 251 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 RANGRFQ9HD47 186 aaPredicted RBP9.52□□□□□ -0.88
SMAD4-205ENST00000588745 KCNIP1Q9NZI2 227 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 C14orf166Q9Y224 244 aaKnown RBP9.52□□□□□ -0.88
SMAD4-205ENST00000588745 PPIAL4AQ9Y536 164 aa9.52□□□□□ -0.88
SMAD4-205ENST00000588745 FAM172BPA6NC97 362 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 C12orf77C9JDV5 145 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 SIGLEC5O15389 551 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 TUSC2O75896 110 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 CD8AP01732 235 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 GYPAP02724 150 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 SOD3P08294 240 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 SELLP14151 372 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 AKR1C4P17516 323 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 PI3P19957 117 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 GLIPR1P48060 266 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 UCP3P55916 312 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 P2RX3P56373 397 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 FXYD4P59646 89 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 IL13RA1P78552 427 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 DHODHQ02127 395 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 TMEM128Q5BJH2 165 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 TRAT1Q6PIZ9 186 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 SLC38A6Q8IZM9 456 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 TPRX1Q8N7U7 411 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 ZFAND1Q8TCF1 268 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 FYTTD1Q96QD9 318 aaKnown RBP9.51□□□□□ -0.89
SMAD4-205ENST00000588745 CCL13Q99616 98 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 TRAF4Q9BUZ4 470 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-205ENST00000588745 RAB1BQ9H0U4 201 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 DNTTIP1Q9H147 329 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 SLC23A1Q9UHI7 598 aa9.51□□□□□ -0.89
SMAD4-205ENST00000588745 KLF2Q9Y5W3 355 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-205ENST00000588745 DSCAMO60469 2012 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 A0A1B0GW55 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 ODAMA1E959 279 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 C9orf170A2RU37 121 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L2P0CJ85 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L3P0CJ86 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L4P0CJ87 422 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L5P0CJ88 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L6P0CJ89 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L7P0CJ90 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 ANXA3P12429 323 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 CXCL3P19876 107 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 VAMP1P23763 118 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 ERP29P30040 261 aaKnown RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 HFEQ30201 348 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4L9Q6RFH8 374 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 H1FOOQ8IZA3 346 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 TCTE3Q8IZS6 198 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 PRR18Q8N4B5 295 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 C12orf45Q8N5I9 185 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 SPICQ8N5J4 248 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 FAM216BQ8N7L0 139 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR5D13Q8NGL4 314 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR13A1Q8NGR1 328 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR10J5Q8NHC4 309 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 MRGPRDQ8TDS7 321 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 IL1F10Q8WWZ1 152 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 LURAP1Q96LR2 239 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 NCOR1P1Q9H4R4 102 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 UBTD1Q9HAC8 227 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR1A1Q9P1Q5 309 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 MGAT4CQ9UBM8 478 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 DUX4Q9UBX2 424 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 ABCA4P78363 2273 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 SFT2D2O95562 160 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 HBZP02008 142 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 RPS2P15880 293 aaKnown RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 CD34P28906 385 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 EDDM3BP56851 147 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 ABCA11PQ4W5N1 156 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR2AK2Q8NG84 335 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR1L1Q8NH94 360 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 UBALD1Q8TB05 177 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 MITD1Q8WV92 249 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 NEU4Q8WWR8 484 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms