RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CGB3P0DN86 165 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 CGB7P0DN87 165 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 VHLP40337 213 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 GPR176Q14439 515 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 MPV17LQ2QL34 196 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 ABCA11PQ4W5N1 156 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 NHLRC3Q5JS37 347 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 C9orf152Q5JTZ5 239 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 LIPKQ5VXJ0 399 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 AWAT2Q6E213 333 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 UNQ9370/PRO34162Q6UXP9 181 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 C16orf82Q7Z2V1 217 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 LINC00596Q86U02 117 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 CCDC107Q8WV48 283 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 TMEM203Q969S6 136 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 NCOR1P1Q9H4R4 102 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 LIN7BQ9HAP6 207 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 PSG11Q9UQ72 335 aa10.17□□□□□ -0.78
NPLOC4-213ENST00000573519 A0A1W2PPE3 182 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 SH2D7A6NKC9 451 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 OOSP1A8MZH6 123 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 LY6LH3BQJ8 138 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 OR2F2O95006 317 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 LPLP06858 475 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 MAPK3P27361 379 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 RPS25P62851 125 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 PAX5Q02548 391 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 HES1Q14469 280 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 FBLN7Q53RD9 439 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 PRSS48Q7RTY5 328 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 LYPD6Q86Y78 171 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 MS4A15Q8N5U1 240 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 OR10X1Q8NGY0 326 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 UBALD1Q8TB05 177 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 UFD1Q92890 307 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 ARL11Q969Q4 196 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 RBM14Q96PK6 669 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 CITED2Q99967 270 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 BANF2Q9H503 90 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 IFT22Q9H7X7 185 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 RAB26Q9ULW5 256 aa10.16□□□□□ -0.78
NPLOC4-213ENST00000573519 A0A1W2PRX2 142 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 MCRIP1C9JLW8 97 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 AIPO00170 330 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 SDCBPO00560 298 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 CRTAPO75718 401 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 SNRNP70P08621 437 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 FAM106CPP0CH98 169 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 GZMHP20718 246 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 MADCAM1Q13477 382 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 DIAPH2-AS1Q14236 149 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 RBM48Q5RL73 367 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 CENPVQ7Z7K6 275 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 LRRTM1Q86UE6 522 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 TMEM104Q8NE00 496 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 OR10A7Q8NGE5 316 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 OR56B4Q8NH76 319 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 CYYR1Q96J86 154 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 SELENOIQ9C0D9 397 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 WNT10AQ9GZT5 417 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 LINC00574Q9H8X3 128 aa10.15□□□□□ -0.78
NPLOC4-213ENST00000573519 VWFP04275 2813 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 OPN1MWP04001 364 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 OPN1MW2P0DN77 364 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 OPN1MW3P0DN78 364 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 RAB7AP51149 207 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 EMX1Q04741 257 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 GPR50Q13585 617 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 TPBGQ13641 420 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 HSD17B12Q53GQ0 312 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 RAB12Q6IQ22 244 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 TMEM91Q6ZNR0 172 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 NDUFA11Q86Y39 141 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 PRR18Q8N4B5 295 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 DRAM1Q8N682 238 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 NKAIN3Q8N8D7 197 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 OR5AU1Q8NGC0 362 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 THRSPQ92748 146 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM46BQ96A09 425 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 R3HDM4Q96D70 268 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 OCSTAMPQ9BR26 566 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 SPACA1Q9HBV2 294 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 ETAA1Q9NY74 926 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 TRAPPC2LQ9UL33 140 aa10.14□□□□□ -0.79
NPLOC4-213ENST00000573519 G3V4G9 280 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 HSD17B6O14756 317 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 SC5DO75845 299 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MT-ND4P03905 459 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 UCHL1P09936 223 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MGMTP16455 207 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 TMEM11P17152 192 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 SRMP19623 302 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 REG1BP48304 166 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MLLT11Q13015 90 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 HNF4GQ14541 408 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms