RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 LSM5Q9Y4Y9 91 aaKnown RBP15.32■□□□□ 0.04
SMPD3-211ENST00000568373 A0A1B0GW55 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 A6NLC8 198 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 HSD17B6O14756 317 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 SCGB1D2O95969 90 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 MBPP02686 304 aaPredicted RBP15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4L2P0CJ85 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4L3P0CJ86 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4L4P0CJ87 422 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4L5P0CJ88 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4L6P0CJ89 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4L7P0CJ90 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 ZNF250P15622 560 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 CCDC28AQ8IWP9 274 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 SPACA3Q8IXA5 215 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 BAP18Q8IXM2 172 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 CMTM1Q8IZ96 169 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 FAM122AQ96E09 287 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 TMEM56Q96MV1 263 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 TAAR3PQ9P1P4 343 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 DUX4Q9UBX2 424 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 OR14J1Q9UGF5 321 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 TRAPPC2LQ9UL33 140 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 TP53TG5Q9Y2B4 290 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 UBE2J1Q9Y385 318 aaPredicted RBP15.32■□□□□ 0.04
SMPD3-211ENST00000568373 TMEM56-RWDD3S4R434 201 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 NCOR2Q9Y618 2525 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 K7EPK0 472 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 PRAMEF6Q5VXH4 476 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 WDR82Q6UXN9 313 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 FAM71E2Q8N5Q1 922 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 IL1F10Q8WWZ1 152 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 USB1Q9BQ65 265 aaKnown RBP15.31■□□□□ 0.04
SMPD3-211ENST00000568373 MBNL3Q9NUK0 354 aaKnown RBP15.31■□□□□ 0.04
SMPD3-211ENST00000568373 TRAV39A0A0B4J263 110 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 WNT9BO14905 357 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 RPL12P30050 165 aaKnown RBP15.31■□□□□ 0.04
SMPD3-211ENST00000568373 C3orf36Q3SXR2 165 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 MUCL1Q96DR8 90 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 ZFP57Q9NU63 452 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 GLS2Q9UI32 602 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 WIPI2Q9Y4P8 454 aa15.31■□□□□ 0.04
SMPD3-211ENST00000568373 M0R1B8 84 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 TAAR5O14804 337 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 LMO1P25800 156 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 CEBPDP49716 269 aaPredicted RBP15.3■□□□□ 0.04
SMPD3-211ENST00000568373 ALKBH2Q6NS38 261 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 ACP7Q6ZNF0 438 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 OR52M1Q8NGK5 317 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 GPHA2Q96T91 129 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 BARX1Q9HBU1 254 aaPredicted RBP15.3■□□□□ 0.04
SMPD3-211ENST00000568373 ZC4H2Q9NQZ6 224 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 OR1A1Q9P1Q5 309 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 ERRFI1Q9UJM3 462 aaPredicted RBP15.3■□□□□ 0.04
SMPD3-211ENST00000568373 SESN1Q9Y6P5 492 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 CADP27708 2225 aa15.3■□□□□ 0.04
SMPD3-211ENST00000568373 TEX46H3BTG2 121 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 SHOXO15266 292 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 PSPNO60542 156 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 HSD17B13Q7Z5P4 300 aaPredicted RBP15.29■□□□□ 0.04
SMPD3-211ENST00000568373 ZNF695Q8IW36 515 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 BVESQ8NE79 360 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 UFSP2Q9NUQ7 469 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 E5RGE8 158 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 PGLYRP1O75594 196 aaPredicted RBP15.29■□□□□ 0.04
SMPD3-211ENST00000568373 CDS2O95674 445 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 CRYAAP02489 173 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 FGF2P09038 288 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 UCP1P25874 307 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 S100GP29377 79 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 TDGF1P3P51864 188 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 MZT1Q08AG7 82 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 HMGN3Q15651 99 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 MSMPQ1L6U9 139 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 SELENOHQ8IZQ5 122 aaKnown RBP15.29■□□□□ 0.04
SMPD3-211ENST00000568373 PRR18Q8N4B5 295 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 EIF4E3Q8N5X7 224 aaKnown RBP15.29■□□□□ 0.04
SMPD3-211ENST00000568373 PLEKHA2Q9HB19 425 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 NSG2Q9Y328 171 aa15.29■□□□□ 0.04
SMPD3-211ENST00000568373 A8MXK9 166 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 H0Y980 276 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.28■□□□□ 0.04
SMPD3-211ENST00000568373 PLA2G5P39877 138 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 HOXA4Q00056 320 aaPredicted RBP15.28■□□□□ 0.04
SMPD3-211ENST00000568373 GALNT11Q8NCW6 608 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 OR10V1Q8NGI7 309 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 OR4D5Q8NGN0 318 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 PRR7Q8TB68 274 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 SPEF1Q9Y4P9 236 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 ZZEF1O43149 2961 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 DUXBA0A1W2PPF3 345 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 TMEM30CPA0ZSE6 113 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 A8MXE2 369 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 ST8SIA3O43173 380 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 TNFSF12O43508 249 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 TESK1Q15569 626 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 Q8NA96 180 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 LILRB1Q8NHL6 650 aaPredicted RBP15.28■□□□□ 0.04
SMPD3-211ENST00000568373 DNTTIP1Q9H147 329 aa15.28■□□□□ 0.04
SMPD3-211ENST00000568373 TAF9BQ9HBM6 251 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms