RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 AGTRAPQ6RW13 159 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 NEGR1Q7Z3B1 354 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 RBM23Q86U06 439 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 SECTM1Q8WVN6 248 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 RNF157Q96PX1 679 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 HSPB9Q9BQS6 159 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MRPL18Q9H0U6 180 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 OR51I2Q9H344 312 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 UQCC1Q9NVA1 299 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 KLK11Q9UBX7 282 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MMP17Q9ULZ9 603 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 WIPI2Q9Y4P8 454 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 UBIAD1Q9Y5Z9 338 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 ANKRD31Q8N7Z5 1873 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 FRMPD3Q5JV73 1810 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 TRAV36DV7A0A075B6V5 113 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 A0A087WUU8 490 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 CIB4A0PJX0 185 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 MSGN1A6NI15 193 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 SAP18O00422 153 aaKnown RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 SOCS2O14508 198 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 IGKV1D-16P01601 117 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 CELA2AP08217 269 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 COX5AP20674 150 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 FCN2Q15485 313 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ELAVL1Q15717 326 aaKnown RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 IZUMO4Q1ZYL8 232 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 PRR31Q5SQ13 230 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ZFAND6Q6FIF0 208 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 C8orf82Q6P1X6 216 aaPredicted RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 HSD17B13Q7Z5P4 300 aaPredicted RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 OAFQ86UD1 273 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 P2RY8Q86VZ1 359 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 VRK3Q8IV63 474 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ZNF843Q8N446 348 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ZNF433Q8N7K0 673 aaPredicted RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 THEM6Q8WUY1 208 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 SRSF12Q8WXF0 261 aaKnown RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 C2orf48Q96LS8 159 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 FAAP24Q9BTP7 215 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 TM2D1Q9BX74 207 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 TMEM126AQ9H061 195 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ZDHHC11Q9H8X9 412 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ASF1AQ9Y294 204 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ZNF256Q9Y2P7 627 aaPredicted RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 RGPD2P0DJD1 1756 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 TRBV5-5A0A0J9YX44 114 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 A0A0J9YY10 115 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 A0A1B0GX78 115 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 NPIPB9F8W1W9 429 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 BUB3O43684 328 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 ZNF682O95780 498 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 IGHV2-5P01817 119 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 BRS3P32247 399 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 GP2P55259 537 aaKnown RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 RAB5BP61020 215 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 HBA1P69905 142 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 VAX1Q5SQQ9 334 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 TEX36Q5VZQ5 186 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 OR2T5Q6IEZ7 315 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 SHFQ7M4L6 423 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 DTWD1Q8N5C7 304 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 OR2T29Q8NH02 315 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 TMED6Q8WW62 240 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 DEDD2Q8WXF8 326 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 KLK6Q92876 244 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 RCN3Q96D15 328 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 DNAJA3Q96EY1 480 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 RARRES2Q99969 163 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 NAA38Q9BRA0 125 aaKnown RBP3.95□□□□□ -1.78
SMG1-207ENST00000563235 KCNJ16Q9NPI9 418 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 TAS2R5Q9NYW4 299 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 POLR1DQ9Y2S0 133 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 RALGAPA1Q6GYQ0 2036 aa3.95□□□□□ -1.78
SMG1-207ENST00000563235 MED19A0JLT2 244 aaPredicted RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 EEF1E1-BLOC1S5C9J1V9 151 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 MRPS12O15235 138 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 RBFOX2O43251 390 aaKnown RBP eCLIP3.94□□□□□ -1.78
SMG1-207ENST00000563235 EEF1E1O43324 174 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 ICOSLGO75144 302 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CSN2P05814 226 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 OR5AL1P0C617 328 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 GKN3PP0CG01 181 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 PGA4P0DJD7 388 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 PGA3P0DJD8 388 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 PGA5P0DJD9 388 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SLC2A5P22732 501 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CRHBPP24387 322 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SHC1P29353 583 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 GPR183P32249 361 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 ARL2P36404 184 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CTRLP40313 264 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 GABRA2P47869 451 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SUB1P53999 127 aaKnown RBP eCLIP3.94□□□□□ -1.78
SMG1-207ENST00000563235 ABCE1P61221 599 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 SLC35A2P78381 396 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SLC10A1Q14973 349 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 NRF1Q16656 503 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 NXNL2Q5VZ03 156 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms