RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TNFSF12O43508 249 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 PRR30Q53SZ7 412 aaPredicted RBP16.12■□□□□ 0.17
SMPD3-203ENST00000563226 TMEM268Q5VZI3 342 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 FAM185AQ8N0U4 392 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 OR52M1Q8NGK5 317 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 OR10J5Q8NHC4 309 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 TRAPPC2LQ9UL33 140 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 A0A1B0GWJ7 208 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 A8MXE2 369 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 DEDDO75618 318 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 PTBP3O95758 552 aaKnown RBP16.11■□□□□ 0.17
SMPD3-203ENST00000563226 MBPP02686 304 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-203ENST00000563226 ZNF250P15622 560 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 P2RX3P56373 397 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 ACP7Q6ZNF0 438 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 OR2Z1Q8NG97 314 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 TMEM222Q9H0R3 208 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 DNAJB11Q9UBS4 358 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 OR2W1Q9Y3N9 320 aa16.11■□□□□ 0.17
SMPD3-203ENST00000563226 A0A0G2JNJ9 132 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 HKR1P10072 659 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 CCKARP32238 428 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 VHLLQ6RSH7 139 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 PDZD9Q8IXQ8 264 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 MUCL1Q96DR8 90 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 SDHAF2Q9NX18 166 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 TAAR3PQ9P1P4 343 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 Q9UFV3 132 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 SH3BGRL2Q9UJC5 107 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 METRNQ9UJH8 293 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 ERRFI1Q9UJM3 462 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 NUP62P37198 522 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 SPRNQ5BIV9 151 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 FIP1L1Q6UN15 594 aaKnown RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 MOB1BQ7L9L4 216 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 SPERTQ8NA61 448 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 GALNT11Q8NCW6 608 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 LILRB1Q8NHL6 650 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 STOML3Q8TAV4 291 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 PARP12Q9H0J9 701 aaKnown RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 SLC25A32Q9H2D1 315 aa16.1■□□□□ 0.17
SMPD3-203ENST00000563226 MBNL3Q9NUK0 354 aaKnown RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 FBXO9Q9UK97 447 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 UBE2J1Q9Y385 318 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-203ENST00000563226 PTPRQQ9UMZ3 2332 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 MFSD2BA6NFX1 497 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 ZSCAN5BA6NJL1 495 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 ATP6V1G2-DDX39BF2Z307 99 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 K7EPK0 472 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 PRRG2O14669 202 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 GFRA3O60609 400 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 NKX6-1P78426 367 aaPredicted RBP16.09■□□□□ 0.17
SMPD3-203ENST00000563226 SNTB1Q13884 538 aaKnown RBP16.09■□□□□ 0.17
SMPD3-203ENST00000563226 C1orf174Q8IYL3 243 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 FAM71E2Q8N5Q1 922 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 RBPMSQ93062 196 aaKnown RBP16.09■□□□□ 0.17
SMPD3-203ENST00000563226 PHYHIPLQ96FC7 376 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 SHARPINQ9H0F6 387 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 MED9Q9NWA0 146 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 WIPI2Q9Y4P8 454 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 CRYAAP02489 173 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 HOXD4P09016 255 aaPredicted RBP16.09■□□□□ 0.17
SMPD3-203ENST00000563226 LMO1P25800 156 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 TESK1Q15569 626 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 SELENOHQ8IZQ5 122 aaKnown RBP16.09■□□□□ 0.17
SMPD3-203ENST00000563226 TMEM56Q96MV1 263 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 TAF9BQ9HBM6 251 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 TMEM56-RWDD3S4R434 201 aa16.09■□□□□ 0.17
SMPD3-203ENST00000563226 NKX2-6A6NCS4 301 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 NPIPB11E5RHQ5 1161 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 PGLYRP1O75594 196 aaPredicted RBP16.08■□□□□ 0.16
SMPD3-203ENST00000563226 EGR1P18146 543 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 HMGN3Q15651 99 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 GFRALQ6UXV0 394 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 LRRC29Q8WV35 223 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 MSRB2Q9Y3D2 182 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 TMED3Q9Y3Q3 217 aa16.08■□□□□ 0.16
SMPD3-203ENST00000563226 AESQ08117 197 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 SMCO1Q147U7 214 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 OR10V1Q8NGI7 309 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 SNRNP40Q96DI7 357 aaKnown RBP16.07■□□□□ 0.16
SMPD3-203ENST00000563226 BARX1Q9HBU1 254 aaPredicted RBP16.07■□□□□ 0.16
SMPD3-203ENST00000563226 IGLV2-14P01704 120 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 IGHV3-13P01766 116 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 TPT1P13693 172 aaKnown RBP16.07■□□□□ 0.16
SMPD3-203ENST00000563226 RPL12P30050 165 aaKnown RBP16.07■□□□□ 0.16
SMPD3-203ENST00000563226 GLRXP35754 106 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 C3orf36Q3SXR2 165 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 ZNF695Q8IW36 515 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 BAP18Q8IXM2 172 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 OR4D5Q8NGN0 318 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 TMEM171Q8WVE6 324 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 COQ2Q96H96 371 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 OR2S2Q9NQN1 319 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
SMPD3-203ENST00000563226 TMEM30CPA0ZSE6 113 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-203ENST00000563226 CDS2O95674 445 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 UCP1P25874 307 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms