RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TIPARPQ7Z3E1 657 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 COMMD2Q86X83 199 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 MRPL41Q8IXM3 137 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 H1FOOQ8IZA3 346 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 OR51T1Q8NGJ9 327 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 PLEKHF2Q9H8W4 249 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 IL17BQ9UHF5 180 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 DHRS7CA6NNS2 312 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 SOX15O60248 233 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 CDS2O95674 445 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 TCN2P20062 427 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 MPLP40238 635 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 SRPXP78539 464 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 ENDOGQ14249 297 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 ABCA11PQ4W5N1 156 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 NABP1Q96AH0 204 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 FAM71F1Q96KD3 344 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 TM2D1Q9BX74 207 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 SRXN1Q9BYN0 137 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 PCSK5Q92824 1860 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 GJE1A6NN92 205 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 P04436 131 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 BCL2P10415 239 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 EDN3P14138 238 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 MMP9P14780 707 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 SRD5A2P31213 254 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 GUCA1AP43080 201 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 RAB11AP62491 216 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 DOK3Q7L591 496 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 RNF144BQ7Z419 303 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 FAM185AQ8N0U4 392 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 SSC4DQ8WTU2 575 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 ARRDC1-AS1Q9H2J1 176 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 FKBP11Q9NYL4 201 aa12.03□□□□□ -0.48
RABGGTA-220ENST00000560998 NCKAP5O14513 1909 aa12.02□□□□□ -0.48
RABGGTA-220ENST00000560998 DHHO43323 396 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF728P0DKX0 622 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 HIST1H3AP68431 136 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 SSPNQ14714 243 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 YRDCQ86U90 279 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 GPER1Q99527 375 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 ZPBPQ9BS86 351 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 STRADBQ9C0K7 418 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 LYRM2Q9NU23 88 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF701Q9NV72 531 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 GAB2Q9UQC2 676 aa12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 POLR3KQ9Y2Y1 108 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-220ENST00000560998 E9PLN8 166 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 DNPH1O43598 174 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 BLVRBP30043 206 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 GNG10P50151 68 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 ACTL10Q5JWF8 245 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF66Q6ZN08 573 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 C20orf196Q8IYI0 205 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 GBGT1Q8N5D6 347 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 MSI2Q96DH6 328 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 SPACA5Q96QH8 159 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 SPIN2AQ99865 258 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 SPIN2BQ9BPZ2 258 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 C20orf144Q9BQM9 153 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 Q9N2K0 584 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 NAGKQ9UJ70 344 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 ANXA10Q9UJ72 324 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 SLC7A11Q9UPY5 501 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 IGSF23A1L1A6 192 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 C5orf63A6NC05 138 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 LRRC3CA6NJW4 275 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 IGLV3-1P01715 115 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 SERPINA7P05543 415 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 DBHP09172 617 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 RAC3P60763 192 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 TMEM241Q24JQ0 296 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 CENPVQ7Z7K6 275 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 CCDC71LQ8N9Z2 235 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 KCNE4Q8WWG9 221 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 PGAM5Q96HS1 289 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 LYZL4Q96KX0 146 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 OR5B12Q96R08 314 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 RBM24Q9BX46 236 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 GAL3ST2Q9H3Q3 398 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 CALHM2Q9HA72 323 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 LPAR2Q9HBW0 351 aa12.01□□□□□ -0.49
RABGGTA-220ENST00000560998 DMDP11532 3685 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 WDFY3Q8IZQ1 3526 aa12□□□□□ -0.49
RABGGTA-220ENST00000560998 SP9P0CG40 484 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms