RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 TGIF2LXQ8IUE1 241 aa13.7□□□□□ -0.22
CRTC3-208ENST00000560098 IZUMO1Q8IYV9 350 aa13.7□□□□□ -0.22
CRTC3-208ENST00000560098 CBR4Q8N4T8 237 aa13.7□□□□□ -0.22
CRTC3-208ENST00000560098 RHOXF1Q8NHV9 184 aa13.7□□□□□ -0.22
CRTC3-208ENST00000560098 RGP1Q92546 391 aaPredicted RBP13.7□□□□□ -0.22
CRTC3-208ENST00000560098 IGHV3-72A0A0B4J1Y9 119 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 NCBP2LA6PVI3 153 aaKnown RBP13.69□□□□□ -0.22
CRTC3-208ENST00000560098 H3BNX3 289 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
CRTC3-208ENST00000560098 CDRT1O95170 752 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 CD2P06729 351 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 GTF2A1P52655 376 aaPredicted RBP13.69□□□□□ -0.22
CRTC3-208ENST00000560098 NHLRC3Q5JS37 347 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 Q8N6K4 173 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 OR52M1Q8NGK5 317 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 OR52I1Q8NGK6 324 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 OR52N1Q8NH53 320 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 GPR148Q8TDV2 347 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 GON7Q9BXV9 100 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 METTL9Q9H1A3 318 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 ABCG5Q9H222 651 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 LIN7CQ9NUP9 197 aaKnown RBP13.69□□□□□ -0.22
CRTC3-208ENST00000560098 IL36GQ9NZH8 169 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 ING4Q9UNL4 249 aa13.69□□□□□ -0.22
CRTC3-208ENST00000560098 C15orf65H3BRN8 121 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 CCL24O00175 119 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 GPR12P47775 334 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 GP2P55259 537 aaKnown RBP13.68□□□□□ -0.22
CRTC3-208ENST00000560098 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
CRTC3-208ENST00000560098 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 LINC00311Q8N616 119 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 OR2T10Q8NGZ9 312 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 ARL11Q969Q4 196 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 TMEM106AQ96A25 262 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 DCLRE1BQ9H816 532 aa13.68□□□□□ -0.22
CRTC3-208ENST00000560098 MRPS18AQ9NVS2 196 aaKnown RBP13.68□□□□□ -0.22
CRTC3-208ENST00000560098 RPL36Q9Y3U8 105 aaKnown RBP13.68□□□□□ -0.22
CRTC3-208ENST00000560098 SDCBPO00560 298 aaPredicted RBP13.67□□□□□ -0.22
CRTC3-208ENST00000560098 GEMIN2O14893 280 aaKnown RBP13.67□□□□□ -0.22
CRTC3-208ENST00000560098 RAMP3O60896 148 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 CSTBP04080 98 aaKnown RBP13.67□□□□□ -0.22
CRTC3-208ENST00000560098 RPLP1P05386 114 aaKnown RBP13.67□□□□□ -0.22
CRTC3-208ENST00000560098 ZNF93P35789 620 aaPredicted RBP13.67□□□□□ -0.22
CRTC3-208ENST00000560098 RAB25P57735 213 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 ZFP1Q6P2D0 407 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 RPL22L1Q6P5R6 122 aaKnown RBP13.67□□□□□ -0.22
CRTC3-208ENST00000560098 LINC00596Q86U02 117 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 Q8N9W7 124 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 TFAP2CQ92754 450 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 S100A13Q99584 98 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 TMEM138Q9NPI0 162 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 GFOD1Q9NXC2 390 aa13.67□□□□□ -0.22
CRTC3-208ENST00000560098 ORC5O43913 435 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 LIMS3P0CW19 117 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 LIMS4P0CW20 117 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 IL3RAP26951 378 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 CD1BP29016 333 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 PPP3R1P63098 170 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 MPV17LQ2QL34 196 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 CCDC58Q4VC31 144 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 CXorf66Q5JRM2 361 aaPredicted RBP13.66□□□□□ -0.22
CRTC3-208ENST00000560098 DDI2Q5TDH0 399 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 OR8U1Q8NH10 309 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 UBALD1Q8TB05 177 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 RTN4IP1Q8WWV3 396 aaPredicted RBP13.66□□□□□ -0.22
CRTC3-208ENST00000560098 ST6GALNAC6Q969X2 333 aa13.66□□□□□ -0.22
CRTC3-208ENST00000560098 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
CRTC3-208ENST00000560098 LOC100130705A0A1B0GUX0 176 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 MOSP00540 346 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 SERPINA2P20848 420 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 FOXE3Q13461 319 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 GPR50Q13585 617 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 KIR2DS1Q14954 304 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 DEFB136Q30KP8 78 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 XAF1Q6GPH4 301 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 FAM53AQ6NSI3 398 aaPredicted RBP13.65□□□□□ -0.22
CRTC3-208ENST00000560098 RNF152Q8N8N0 203 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 PLSCR3Q9NRY6 295 aa13.65□□□□□ -0.22
CRTC3-208ENST00000560098 IGHV3-43A0A0B4J1X8 118 aa13.64□□□□□ -0.23
CRTC3-208ENST00000560098 RRP9O43818 475 aaKnown RBP13.64□□□□□ -0.23
CRTC3-208ENST00000560098 ZNF780AO75290 641 aaPredicted RBP13.64□□□□□ -0.23
CRTC3-208ENST00000560098 MT-ND4P03905 459 aa13.64□□□□□ -0.23
CRTC3-208ENST00000560098 ELANEP08246 267 aa13.64□□□□□ -0.23
CRTC3-208ENST00000560098 NHLRC4P0CG21 123 aaPredicted RBP13.64□□□□□ -0.23
CRTC3-208ENST00000560098 IGHV3-43DP0DP04 118 aa13.64□□□□□ -0.23
CRTC3-208ENST00000560098 BDKRB2P30411 391 aa13.64□□□□□ -0.23
CRTC3-208ENST00000560098 CDX1P47902 265 aaPredicted RBP13.64□□□□□ -0.23
CRTC3-208ENST00000560098 LUMP51884 338 aaPredicted RBP13.64□□□□□ -0.23
CRTC3-208ENST00000560098 Q3ZCU0 254 aa13.64□□□□□ -0.23
CRTC3-208ENST00000560098 ZNF497Q6ZNH5 498 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms