RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 YPEL2Q96QA6 119 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 HIST1H2AAQ96QV6 131 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 ATG101Q9BSB4 218 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 OR2J1Q9GZK6 312 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 WWTR1Q9GZV5 400 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 PRORYQ9H606 182 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 ELOVL3Q9HB03 270 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 NAT8Q9UHE5 227 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 LIPGQ9Y5X9 500 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 GPR179Q6PRD1 2367 aa4.56□□□□□ -1.68
USP28-213ENST00000544967 KIAA1549Q9HCM3 1950 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 DCDC2BA2VCK2 349 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OR6C6A6NF89 314 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 DHRS7CA6NNS2 312 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 F6UZH7 168 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 HS3ST1O14792 307 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 VENTXO95231 258 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 IFNA1P01562 189 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 VSIG8P0DPA2 414 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PSMB5P28074 263 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PTGER4P35408 488 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 APLNRP35414 380 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 COL10A1Q03692 680 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 ALG10Q5BKT4 473 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OR8G2PQ6IF36 304 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 FIGLAQ6QHK4 219 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 LINC01551Q86U37 167 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OR4B1Q8NGF8 309 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OR6N2Q8NGY6 317 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OR52N5Q8NH56 324 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 ZPLD1Q8TCW7 415 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 RAB1CQ92928 201 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 G6PC3Q9BUM1 346 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 LPAR5Q9H1C0 372 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OCIAD1Q9NX40 245 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 FOXJ2Q9P0K8 574 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PEF1Q9UBV8 284 aaKnown RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 ZNF346Q9UL40 294 aaKnown RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 FEZF1A0PJY2 475 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 C4orf51C9J302 202 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 TMEM250H0YL14 139 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SIAH2O43255 324 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 HCRTR1O43613 425 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 TIAF1O95411 115 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 REG1AP05451 166 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 FUT3P21217 361 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SLC9A3R2Q15599 337 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.55□□□□□ -1.68
USP28-213ENST00000544967 MPV17LQ2QL34 196 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 C1orf189Q5VU69 101 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 FBXL14Q8N1E6 418 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 CYB561D1Q8N8Q1 229 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 TECTBQ96PL2 329 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 NRTNQ99748 197 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SPIN2AQ99865 258 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SPIN2BQ9BPZ2 258 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PSMG3Q9BT73 122 aaPredicted RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 SCNM1Q9BWG6 230 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 TM2D1Q9BX74 207 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 G6PC2Q9NQR9 355 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 CBLN4Q9NTU7 201 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 CDC42EP3Q9UKI2 254 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PKD1L2Q7Z442 2459 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 IGKV1D-42A0A075B6H8 117 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 C20orf202A1L168 122 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 MAP1LC3B2A6NCE7 125 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 FOXS1O43638 330 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 HRASP01112 189 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 BCL2P10415 239 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 IRF2P14316 349 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 AREGP15514 252 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SERPINA2P20848 420 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 EMP2P54851 167 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 ZNF92Q03936 586 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 MGAT2Q10469 447 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PRSS8Q16651 343 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 ATP6V1FQ16864 119 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 DCAF12Q5T6F0 453 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PRAMEF5Q5TYX0 476 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PRAMEF6Q5VXH4 476 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 DMRTA1Q5VZB9 504 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 NCR3LG1Q68D85 454 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 RBPMS2Q6ZRY4 209 aaKnown RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 TIPARPQ7Z3E1 657 aaKnown RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 ATG4DQ86TL0 474 aaPredicted RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 OR51G1Q8NGK1 321 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 OR13C9Q8NGT0 318 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 C1orf159Q96HA4 380 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SLC35E1Q96K37 410 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 IL17FQ96PD4 163 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 ALKBH7Q9BT30 221 aaPredicted RBP4.55□□□□□ -1.68
USP28-213ENST00000544967 FAAP24Q9BTP7 215 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 MAP1LC3BQ9GZQ8 125 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 PLEKHF2Q9H8W4 249 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 SLC2A9Q9NRM0 540 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 HSPB7Q9UBY9 170 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 IL17BQ9UHF5 180 aa4.55□□□□□ -1.68
USP28-213ENST00000544967 AK3Q9UIJ7 227 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms