RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 TNRC18O15417 2968 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 NRASP01111 189 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 OR3A1P47881 315 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 ZNF818PQ6ZRF7 136 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 DTX1Q86Y01 620 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 CCL28Q9NRJ3 127 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 CHRNA7P36544 502 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 MDH2P40926 338 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 PSMB3P49720 205 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 TDGF1P3P51864 188 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 SUMO3P55854 103 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 MLF1P58340 268 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 KCNIP4Q6PIL6 250 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 TOMM20LQ6UXN7 152 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 SDSLQ96GA7 329 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 CDCA3Q99618 268 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 ULBP2Q9BZM5 246 aa11.08□□□□□ -0.64
SFSWAP-209ENST00000540469 KIAA2026Q5HYC2 2103 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 ZNF92Q03936 586 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 TBX15Q96SF7 602 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 P2RX4Q99571 388 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 NAGKQ9UJ70 344 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 RNF150Q9ULK6 438 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 TCF21O43680 179 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 HRASP01112 189 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 PDGFBP01127 241 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 IGFBP4P22692 258 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 DOCK11Q5JSL3 2073 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 PRAMEF20Q5VT98 475 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 C1orf53Q5VUE5 145 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 OR1L3Q8NH93 324 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 PLA2G3Q9NZ20 509 aa11.07□□□□□ -0.64
SFSWAP-209ENST00000540469 A0A0U1RQK1 487 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 CD300LBA8K4G0 201 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 DLEU1O43261 78 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 CEACAM1P13688 526 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PAX1P15863 534 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 GZMHP20718 246 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 WNT5AP41221 380 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 GNB2P62879 340 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 HBG1P69891 147 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 HBG2P69892 147 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 MEF2BQ02080 365 aaPredicted RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 SPANXN5Q5MJ07 72 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 OR8G2PQ6IF36 304 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 TMEM170AQ8WVE7 144 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 EXTL1Q92935 676 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 SLC25A22Q9H936 323 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PARD6AQ9NPB6 346 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 WNT16Q9UBV4 365 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 MTCH2Q9Y6C9 303 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 DIDO1Q9BTC0 2240 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 ARHGAP21Q5T5U3 1957 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 ID3Q02535 119 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PLPPR5Q32ZL2 321 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 ZNF845Q96IR2 970 aaPredicted RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PATZ1Q9HBE1 687 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PSENENQ9NZ42 101 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 IGKV1-27A0A075B6S5 117 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 TRAV1-1A0A0B4J248 108 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 UBE2L5PA0A1B0GUS4 154 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 TFPI2P48307 235 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 ZFP36L1Q07352 338 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 EIF3IQ13347 325 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 CYP2G1PQ6ZSU1 146 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 PRR18Q8N4B5 295 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 OR10G3Q8NGC4 313 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 OR51G1Q8NGK1 321 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 MRPL30Q8TCC3 161 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 TMEM56Q96MV1 263 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 AURKAIP1Q9NWT8 199 aaPredicted RBP11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 TMEM56-RWDD3S4R434 201 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 SDK2Q58EX2 2172 aa11.06□□□□□ -0.64
SFSWAP-209ENST00000540469 POU2F2P09086 479 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 ANKRD39Q53RE8 183 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 FAM78BQ5VT40 261 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 TGIF2LYQ8IUE0 185 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 OR5L2Q8NGL0 311 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 R3HDM4Q96D70 268 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 CCDC74BQ96LY2 380 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 TRAPPC1Q9Y5R8 145 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 DHHO43323 396 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 SCTP09683 121 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 CD33P20138 364 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 OR10J1P30954 320 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 EXT1Q16394 746 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 ZNF441Q8N8Z8 693 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 RLN3Q8WXF3 142 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 ABHD14BQ96IU4 210 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
SFSWAP-209ENST00000540469 KBTBD11O94819 623 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms