RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZNF780AO75290 641 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-207ENST00000531727 BAG2O95816 211 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 LALBAP00709 142 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-207ENST00000531727 MYL12AP19105 171 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 RIPK1Q13546 671 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 HNF4GQ14541 408 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 OR52M1Q8NGK5 317 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 ARL11Q969Q4 196 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 ORAI1Q96D31 301 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 NOL4LQ96MY1 436 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-207ENST00000531727 ZNF184Q99676 751 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-207ENST00000531727 DIMT1Q9UNQ2 313 aaKnown RBP13.31□□□□□ -0.28
CPSF1-207ENST00000531727 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
CPSF1-207ENST00000531727 IGHV1-3A0A0C4DH29 117 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 TRBV5-5A0A0J9YX44 114 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 SERPINE3A8MV23 424 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 C15orf65H3BRN8 121 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 K7EIL1 84 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 CCRL2O00421 344 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 SDCBPO00560 298 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-207ENST00000531727 GPX5O75715 221 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 IGHG2P01859 326 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 GAPDHP04406 335 aaKnown RBP13.3□□□□□ -0.28
CPSF1-207ENST00000531727 GTF2F2P13984 249 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 RPL23AP62750 156 aaKnown RBP13.3□□□□□ -0.28
CPSF1-207ENST00000531727 EBI3Q14213 229 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 SLC22A6Q4U2R8 563 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 ATAD3CQ5T2N8 411 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 DMKNQ6E0U4 476 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-207ENST00000531727 ETV3LQ6ZN32 361 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 SLC35E3Q7Z769 313 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 LINC00311Q8N616 119 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 C8orf31Q8N9H6 132 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 OR51D1Q8NGF3 324 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 GHSRQ92847 366 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 GFOD1Q9NXC2 390 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 CLEC2DQ9UHP7 191 aa13.3□□□□□ -0.28
CPSF1-207ENST00000531727 A0A1W2PP11 408 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 MAGEA13PA6NCF6 341 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 ORC5O43913 435 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 MT-ND4P03905 459 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 REG1BP48304 166 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 THBS3P49746 956 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 KRTAP10-11P60412 298 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 SLC35B1P78383 322 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 MED21Q13503 144 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 GPR176Q14439 515 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 Q499Y3 187 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 YIF1BQ5BJH7 314 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 ZNF497Q6ZNH5 498 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 OR2W3Q7Z3T1 314 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 MOB3BQ86TA1 216 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 FOXRED2Q8IWF2 684 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 MRPL41Q8IXM3 137 aaKnown RBP13.29□□□□□ -0.28
CPSF1-207ENST00000531727 IZUMO1Q8IYV9 350 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 NEK7Q8TDX7 302 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 CCDC107Q8WV48 283 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 EAF1Q96JC9 268 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-207ENST00000531727 GPR61Q9BZJ8 451 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 ZFP57Q9NU63 452 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 CKLFQ9UBR5 152 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 LINC00527Q9UJ94 153 aa13.29□□□□□ -0.28
CPSF1-207ENST00000531727 TRAV8-7A0A075B6U6 113 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 AIPO00170 330 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 FSTP19883 344 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 SLC6A1P30531 599 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 RPS11P62280 158 aaKnown RBP eCLIP13.28□□□□□ -0.28
CPSF1-207ENST00000531727 EGFEM1PQ0D2K5 195 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 TGIF2LXQ8IUE1 241 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 STX19Q8N4C7 294 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 COMMD1Q8N668 190 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 Q8N6K4 173 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 ZNF485Q8NCK3 441 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 UBALD1Q8TB05 177 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 ST6GALNAC6Q969X2 333 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 TMEM80Q96HE8 168 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 PGLYRP3Q96LB9 341 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 SPACA1Q9HBV2 294 aa13.28□□□□□ -0.28
CPSF1-207ENST00000531727 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
CPSF1-207ENST00000531727 RCC2Q9P258 522 aaKnown RBP13.28□□□□□ -0.28
CPSF1-207ENST00000531727 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 IGHV3-72A0A0B4J1Y9 119 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 IL3RAP26951 378 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 Q3ZCU0 254 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 TTC23Q5W5X9 447 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 FAM53AQ6NSI3 398 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-207ENST00000531727 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 C8orf86Q6ZUL3 223 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 STPG2Q8N412 459 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 ZFP41Q8N8Y5 198 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 OR2T10Q8NGZ9 312 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 CYGBQ8WWM9 190 aa13.27□□□□□ -0.29
CPSF1-207ENST00000531727 RTN4IP1Q8WWV3 396 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-207ENST00000531727 MRPS24Q96EL2 167 aaKnown RBP13.27□□□□□ -0.29
CPSF1-207ENST00000531727 TRBV5-7A0A0A0MS05 114 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 NCBP2LA6PVI3 153 aaKnown RBP13.26□□□□□ -0.29
CPSF1-207ENST00000531727 NUDT19A8MXV4 375 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms