RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	RNF212B	A8MTL3	300 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	LEUTX	A8MZ59	168 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	CDIPT	O14735	213 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	HSD17B6	O14756	317 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	MSTN	O14793	375 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	TAAR5	O14804	337 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	OR2H2	O95918	312 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	IGLV1-44	P01699	117 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	RPS2	P15880	293 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	KITLG	P21583	273 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	GNRHR	P30968	328 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	FABP6	P51161	128 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	RND3	P61587	244 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	ZNF154	Q13106	437 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	RAB32	Q13637	225 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	MBNL2	Q5VZF2	373 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	GFRAL	Q6UXV0	394 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	CCDC28A	Q8IWP9	274 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	GALNT11	Q8NCW6	608 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	NINJ1	Q92982	152 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	MRPL24	Q96A35	216 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	S100PBP	Q96BU1	408 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	NRIP2	Q9BQI9	281 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	TREM2	Q9NZC2	230 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	TMED3	Q9Y3Q3	217 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	NOTCH2	Q04721	2471 aa		9.15	□□□□□ -0.94
SPIDR-222	ENST00000524006	KIAA2026	Q5HYC2	2103 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	ZGRF1	Q86YA3	2104 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	SPTAN1	Q13813	2472 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	BORCS7-ASMT	A0A0B4J1R7	106 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TRAV24	A0A0B4J272	114 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	DUXB	A0A1W2PPF3	345 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	WRB	O00258	174 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	MPPED1	O15442	326 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	ZNF205	O95201	554 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	SCT	P09683	121 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	FAM87A	P0C7U9	286 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	RRAS	P10301	218 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	KLF3	P57682	345 aa	Predicted RBP	9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	VAMP2	P63027	116 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	NAAA	Q02083	359 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	SNTB1	Q13884	538 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TMEM187	Q14656	261 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	GNMT	Q14749	295 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	C3orf36	Q3SXR2	165 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	SP6	Q3SY56	376 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TOR2A	Q5JU69	321 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	SHE	Q5VZ18	495 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TMEM268	Q5VZI3	342 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TBC1D26	Q86UD7	250 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	PRR18	Q8N4B5	295 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR2Z1	Q8NG97	314 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR11L1	Q8NGX0	322 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	PPP1R35	Q8TAP8	253 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR10C1	Q96KK4	312 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	AQP10	Q96PS8	301 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	PLEKHA2	Q9HB19	425 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	UFSP2	Q9NUQ7	469 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TUBD1	Q9UJT1	453 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	FZR1	Q9UM11	496 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	FAM215A	Q9Y5M1	114 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	SLC25A15	Q9Y619	301 aa		9.14	□□□□□ -0.95
SPIDR-222	ENST00000524006	TRBV6-7	A0A0A0MS04	114 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	IGHV3-64D	A0A0J9YX35	117 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006		E5RGE8	158 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	SLC33A1	O00400	549 aa	Predicted RBP	9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	CGA	P01215	116 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	PDGFA	P04085	211 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	BMP5	P22003	454 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	TNFSF4	P23510	183 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	IL2RG	P31785	369 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	KCNJ3	P48549	501 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	CASP6	P55212	293 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	AANAT	Q16613	207 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	TBR1	Q16650	682 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	PRAMEF6	Q5VXH4	476 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	TRAT1	Q6PIZ9	186 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	VHLL	Q6RSH7	139 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	WDR86	Q86TI4	376 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	LRTM2	Q8N967	370 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR1S1	Q8NH92	325 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	STOML3	Q8TAV4	291 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	RBPMS	Q93062	196 aa	Known RBP	9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	USB1	Q9BQ65	265 aa	Known RBP	9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	CABLES2	Q9BTV7	478 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	LIN7C	Q9NUP9	197 aa	Known RBP	9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	SDHAF2	Q9NX18	166 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR5AC2	Q9NZP5	309 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	DUSP13	Q9UII6	198 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	NSG2	Q9Y328	171 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR2W1	Q9Y3N9	320 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	AUP1	Q9Y679	476 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	DOPEY2	Q9Y3R5	2298 aa		9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	PRRC2C	Q9Y520	2896 aa	Known RBP	9.13	□□□□□ -0.95
SPIDR-222	ENST00000524006	MPTX1	A8MV57	137 aa		9.12	□□□□□ -0.95
SPIDR-222	ENST00000524006		H0Y980	276 aa		9.12	□□□□□ -0.95
SPIDR-222	ENST00000524006		H0YL77	283 aa		9.12	□□□□□ -0.95
SPIDR-222	ENST00000524006	ST8SIA3	O43173	380 aa		9.12	□□□□□ -0.95
SPIDR-222	ENST00000524006	DEDD	O75618	318 aa		9.12	□□□□□ -0.95
SPIDR-222	ENST00000524006	CDS2	O95674	445 aa		9.12	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms