RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CR1P17927 2039 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TANC2Q9HCD6 1990 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MAP1AP78559 2803 aaPredicted RBP4.78□□□□□ -1.65
SCARNA6.1-201ENST00000516989 WNK2Q9Y3S1 2297 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 DOCK11Q5JSL3 2073 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 YLPM1P49750 1951 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A0B4J203 849 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TRAV24A0A0B4J272 114 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MEX3AA1L020 520 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FUOMA2VDF0 154 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IFITM5A6NNB3 132 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MCRIP1C9JLW8 97 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 J3QLI3 93 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SLC33A1O00400 549 aaPredicted RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MGST3O14880 152 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SLC22A1O15245 554 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF737O75373 536 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CD37P11049 281 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SLC2A2P11168 524 aaPredicted RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 HNF1AP20823 631 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TGFBR1P36897 503 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RPL5P46777 297 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ALDH3B2P48448 385 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SERPINB10P48595 397 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RBM11P57052 281 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RPL31P62899 125 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 AESQ08117 197 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MPV17LQ2QL34 196 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CHRFAM7AQ494W8 412 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PAN3Q58A45 887 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 KRBOX4Q5JUW0 171 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IDNKQ5T6J7 187 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 METTL11BQ5VVY1 283 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IL17RELQ6ZVW7 336 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TRAPPC6BQ86SZ2 158 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CLVS1Q8IUQ0 354 aaPredicted RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PDZD9Q8IXQ8 264 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 OR8H2Q8N162 312 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TPRX1Q8N7U7 411 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SUMF2Q8NBJ7 301 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CHST4Q8NCG5 386 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 Q8NFD4 153 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NEK7Q8TDX7 302 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SLC25A28Q96A46 364 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PCGF1Q9BSM1 259 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 URM1Q9BTM9 101 aaKnown RBP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TMEM59Q9BXS4 323 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PPA2Q9H2U2 334 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 KCNK15Q9H427 330 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PRDM13Q9H4Q3 707 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 AKIP1Q9NQ31 210 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 C19orf12Q9NSK7 152 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ONECUT1Q9UBC0 465 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 DAPK2Q9UIK4 370 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PEX16Q9Y5Y5 336 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 HIVEP2P31629 2446 aa4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCARNA6.1-201ENST00000516989 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IGHV3OR16-10A0A075B7F0 116 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TMEM272A0A1B0GTI8 110 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 hCG_1809904A0A1W2PP81 198 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A1W2PPE2 198 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A1W2PR64 198 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A1W2PRV1 198 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 hADV38S2A0JD32 116 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TMEM14DPA8MWL7 114 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 AIPO00170 330 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CSF1P09603 554 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CCL3L1P16619 93 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FUT3P21217 361 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 BLVRBP30043 206 aaPredicted RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 OR3A1P47881 315 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GLIPR1P48060 266 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 VEGFCP49767 419 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RPL15P61313 204 aaKnown RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 VBP1P61758 197 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NCS1P62166 190 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RPP30P78346 268 aaKnown RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 QRFPP83859 136 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PAX2Q02962 417 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PRB3Q04118 309 aaPredicted RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 UNC119Q13432 240 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RBM39Q14498 530 aaKnown RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF273Q14593 569 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ATXN7L3Q14CW9 347 aaPredicted RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NHLRC3Q5JS37 347 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RAB12Q6IQ22 244 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SFXN4Q6P4A7 337 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 OR2W3Q7Z3T1 314 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 LINC00596Q86U02 117 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ANKRD13BQ86YJ7 626 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TEX29Q8N6K0 151 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF565Q8N9K5 539 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 LY6G5BQ8NDX9 201 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NANPQ8TBE9 248 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms