RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 C2orf73Q8N5S3 287 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 RNF182Q8N6D2 247 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 CMBLQ96DG6 245 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 SMIM19Q96E16 107 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 REEP6Q96HR9 211 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 SLC22A4Q9H015 551 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 METTL9Q9H1A3 318 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 VSIRQ9H7M9 311 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 ZNF586Q9NXT0 402 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 RIMS2Q9UQ26 1411 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 THADAQ6YHU6 1953 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 K7ERS5 55 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 PDYNP01213 254 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 INAFM2P0DMQ5 153 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 CD79BP40259 229 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 ACTR1BP42025 376 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 MAGEA2P43356 314 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 ELP2Q6IA86 826 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 FAM19A5Q7Z5A7 132 aaPredicted RBP3□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR11L1Q8NGX0 322 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR5K1Q8NHB7 308 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 MAL2Q969L2 176 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 CMTM5Q96DZ9 223 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 SEC22CQ9BRL7 303 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 POTEKPQ9BYX7 375 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 TRIM45Q9H8W5 580 aaPredicted RBP3□□□□□ -1.93
HMGB1P47-201ENST00000511281 BTRCQ9Y297 605 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 NCAPD3P42695 1498 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 BAZ1BQ9UIG0 1483 aaKnown RBP3□□□□□ -1.93
HMGB1P47-201ENST00000511281 NESP48681 1621 aa3□□□□□ -1.93
HMGB1P47-201ENST00000511281 ERCC6Q03468 1493 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 GPR179Q6PRD1 2367 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 IGKV1OR2-108A0A075B7D4 117 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 IGHV3OR15-7A0A075B7D8 119 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 LTAP01374 205 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 PFN1P07737 140 aaKnown RBP2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 C8orf88P0DMB2 117 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 PSKH1P11801 424 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 CTSEP14091 401 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 CLDN12P56749 244 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 RBX1P62877 108 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 CCDC122Q5T0U0 273 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 HENMT1Q5T8I9 393 aaKnown RBP2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 KRTCAP2Q8N6L1 136 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR4C13Q8NGP0 309 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 RMI2Q96E14 147 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 DRC3Q9H069 523 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 USE1Q9NZ43 259 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 TMEM216Q9P0N5 145 aa2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 DHCR7Q9UBM7 475 aaKnown RBP2.99□□□□□ -1.93
HMGB1P47-201ENST00000511281 NUP205Q92621 2012 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 SMARCA4P51532 1647 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 DAPL1A0PJW8 107 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR6C70A6NIJ9 312 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 BIRC5O15392 142 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 ATP6V1G2O95670 118 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 CD34P28906 385 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 AGTR1P30556 359 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 ANP32AP39687 249 aaKnown RBP2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 RAB2AP61019 212 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 CENPWQ5EE01 88 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 CDKL4Q5MAI5 379 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 HES3Q5TGS1 186 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 LAIR2Q6ISS4 152 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 XKRXQ6PP77 449 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 IGFL3Q6UXB1 125 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 CYHR1Q6ZMK1 362 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 TMEM136Q6ZRR5 245 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR9I1Q8NGQ6 314 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 PLA2G12AQ9BZM1 189 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR2D2Q9H210 308 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 TRAPPC1Q9Y5R8 145 aa2.98□□□□□ -1.93
HMGB1P47-201ENST00000511281 TINCRA0A1B0GVN0 87 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR5H14A6NHG9 310 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 A8MWP4 228 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 F5H768 121 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 H3BSA7 217 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 M0QYV0 167 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 AHSA1O95433 338 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 COX5BP10606 129 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 GABRA1P14867 456 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 TGFBR2P37173 567 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 MAGOHP61326 146 aaKnown RBP2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 DNAL1Q4LDG9 190 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 LDLRAD2Q5SZI1 272 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 PRR9Q5T870 116 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 PTRHD1Q6GMV3 140 aaKnown RBP2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 SGPP2Q8IWX5 399 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 CPNE9Q8IYJ1 553 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 Q8N402 240 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 RIBC1Q8N443 379 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 OR5D18Q8NGL1 313 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 KCTD4Q8WVF5 259 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 PPCDCQ96CD2 204 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 PACRGQ96M98 296 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 SPZ1Q9BXG8 430 aa2.97□□□□□ -1.93
HMGB1P47-201ENST00000511281 ALX4Q9H161 411 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms