RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 CD37P11049 281 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 PRRX1P54821 245 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 FABP5Q01469 135 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 RBM39Q14498 530 aaKnown RBP12.15□□□□□ -0.46
CLDND1-215ENST00000507874 RAB12Q6IQ22 244 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 ZNF497Q6ZNH5 498 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 ZNF367Q7RTV3 350 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 OR4C13Q8NGP0 309 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 OR9G1Q8NH87 305 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 GFI1Q99684 422 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 RANBP3Q9H6Z4 567 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-215ENST00000507874 ACOT13Q9NPJ3 140 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 FBLN5Q9UBX5 448 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 PEX16Q9Y5Y5 336 aa12.15□□□□□ -0.46
CLDND1-215ENST00000507874 LY6LH3BQJ8 138 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 C15orf65H3BRN8 121 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 J3QR06 171 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 AIPO00170 330 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
CLDND1-215ENST00000507874 UBBP0CG47 229 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 GZMHP20718 246 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 PSMA1P25786 263 aaKnown RBP12.14□□□□□ -0.47
CLDND1-215ENST00000507874 GABRA5P31644 462 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 KIR2DS4P43632 304 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 GABARAPL2P60520 117 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 EMX1Q04741 257 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-215ENST00000507874 SSX1Q16384 188 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 OR10A7Q8NGE5 316 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 CST11Q9H112 138 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 MMP28Q9H239 520 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 ZNF696Q9H7X3 374 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 ETAA1Q9NY74 926 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
CLDND1-215ENST00000507874 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 SLC22A1O15245 554 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 FUT3P21217 361 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 CD24P25063 80 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 HTR2CP28335 458 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 CEACAM3P40198 252 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 GNG10P50151 68 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 EFNB2P52799 333 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 PRR31Q5SQ13 230 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 OR4K15Q8NH41 348 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 ARL11Q969Q4 196 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 CREB3L1Q96BA8 519 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 Q9H521 79 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 ZNF702PQ9H963 129 aa12.13□□□□□ -0.47
CLDND1-215ENST00000507874 AK6Q9Y3D8 172 aaKnown RBP12.13□□□□□ -0.47
CLDND1-215ENST00000507874 UBE2QL1A1L167 161 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 TMEM14DPA8MWL7 114 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 ORC5O43913 435 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 PDCD6O75340 191 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 ARL6IP5O75915 188 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 GLAP06280 429 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
CLDND1-215ENST00000507874 QRFPP83859 136 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 UNC119Q13432 240 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
CLDND1-215ENST00000507874 FAM53AQ6NSI3 398 aaPredicted RBP12.12□□□□□ -0.47
CLDND1-215ENST00000507874 GAPTQ8N292 157 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 OR6M1Q8NGM8 313 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 OR2T6Q8NHC8 308 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 TMEM59Q9BXS4 323 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 TRAPPC2LQ9UL33 140 aa12.12□□□□□ -0.47
CLDND1-215ENST00000507874 RRP15Q9Y3B9 282 aaKnown RBP12.12□□□□□ -0.47
CLDND1-215ENST00000507874 IGHV3-43A0A0B4J1X8 118 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 OOSP1A8MZH6 123 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 SLC17A2O00624 439 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 MRPS14O60783 128 aaKnown RBP12.11□□□□□ -0.47
CLDND1-215ENST00000507874 BPNT1O95861 308 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 IGHV3-43DP0DP04 118 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 CHATP28329 748 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 BRS3P32247 399 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 RPS27AP62979 156 aaKnown RBP12.11□□□□□ -0.47
CLDND1-215ENST00000507874 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
CLDND1-215ENST00000507874 P2RY14Q15391 338 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 SLC16A12Q6ZSM3 486 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 KCNG3Q8TAE7 436 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 RPEQ96AT9 228 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 NICN1Q9BSH3 213 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 PLGRKTQ9HBL7 147 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 GFOD1Q9NXC2 390 aa12.11□□□□□ -0.47
CLDND1-215ENST00000507874 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
CLDND1-215ENST00000507874 SDCBPO00560 298 aaPredicted RBP12.1□□□□□ -0.47
CLDND1-215ENST00000507874 CA11O75493 328 aa12.1□□□□□ -0.47
CLDND1-215ENST00000507874 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
CLDND1-215ENST00000507874 LOXL3P58215 753 aa12.1□□□□□ -0.47
CLDND1-215ENST00000507874 DIAPH2-AS1Q14236 149 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms