RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 SNAPC5O75971 98 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 IFNA17P01571 189 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 SLC10A1Q14973 349 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 HIST2H3PS2Q5TEC6 136 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 TMEM251Q8N6I4 163 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 OR1J1Q8NGS3 322 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 FANCFQ9NPI8 374 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 MTCH1Q9NZJ7 389 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 YLPM1P49750 1951 aaKnown RBP11.56□□□□□ -0.56
GPC1-209ENST00000495100 A0A0U1RQV5 110 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 RAB19A4D1S5 217 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 LY86O95711 162 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 DVL1P1P54792 670 aaPredicted RBP11.56□□□□□ -0.56
GPC1-209ENST00000495100 CYB561D1Q8N8Q1 229 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 ADAMTS17Q8TE56 1095 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 BARX1Q9HBU1 254 aaPredicted RBP11.56□□□□□ -0.56
GPC1-209ENST00000495100 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 EGR1P18146 543 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 S100PP25815 95 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 AESQ08117 197 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 CST9LP1Q5W188 147 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 FADS6Q8N9I5 356 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 GHRLQ9UBU3 117 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 A0A087WZY1 265 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 IGSF23A1L1A6 192 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 TIMM8AO60220 97 aaPredicted RBP11.55□□□□□ -0.56
GPC1-209ENST00000495100 OR3A1P47881 315 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 RAB2AP61019 212 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 ZNF880Q6PDB4 577 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 OR2M7Q8NG81 312 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 TCTEX1D2Q8WW35 142 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 DCTN5Q9BTE1 182 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 FAM157CP0CG43 387 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 NAT2P11245 290 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 ALDH3B1P43353 468 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 SULT1A1P50225 295 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 TMEM187Q14656 261 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 C9orf152Q5JTZ5 239 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 ZNF385CQ66K41 422 aaPredicted RBP11.55□□□□□ -0.56
GPC1-209ENST00000495100 MDP1Q86V88 176 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 FAM58AQ8N1B3 248 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 LEAP2Q969E1 77 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 TTTY12Q9BZ98 90 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 GNG12Q9UBI6 72 aa11.55□□□□□ -0.56
GPC1-209ENST00000495100 TOX3O15405 576 aaPredicted RBP11.54□□□□□ -0.56
GPC1-209ENST00000495100 FGF5P12034 268 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 DNM1P46Q6ZS02 220 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 WFIKKN1Q96NZ8 548 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 SPIN2AQ99865 258 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 SPIN2BQ9BPZ2 258 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 ZNF665Q9H7R5 613 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 NDRG3Q9UGV2 375 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 GAB2Q9UQC2 676 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 CACNA1AO00555 2505 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 GPR137BO60478 399 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 MT-CO3P00414 261 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 H3F3AP84243 136 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 BAXQ07812 192 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 TMEM252Q8N6L7 170 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 AQP10Q96PS8 301 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
GPC1-209ENST00000495100 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 C20orf204Q6ZNR8 217 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 CLDN23Q96B33 292 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 NKX2-8O15522 239 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 WISP2O76076 250 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 SERPINA7P05543 415 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 PRB4P10163 310 aaPredicted RBP11.53□□□□□ -0.56
GPC1-209ENST00000495100 G6PCP35575 357 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 MST1LQ2TV78 715 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 DCAF10Q5QP82 559 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 UBAC2Q8NBM4 344 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 FRZBQ92765 325 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 PSENENQ9NZ42 101 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 WSB1Q9Y6I7 421 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 LRRC3CA6NJW4 275 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 SULT1A2P50226 295 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 WDR25Q64LD2 544 aaPredicted RBP11.53□□□□□ -0.56
GPC1-209ENST00000495100 GGNQ86UU5 652 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 LINC00518Q8N0U6 118 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 VKORC1L1Q8N0U8 176 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 KCNIP1Q9NZI2 227 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 KPTNQ9Y664 436 aa11.53□□□□□ -0.56
GPC1-209ENST00000495100 SPAARA0A1B0GVQ0 90 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 ZNF716A6NP11 495 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 TAAR5O14804 337 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 CST2P09228 141 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 SOX8P57073 446 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 ZNF266Q14584 549 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 HES3Q5TGS1 186 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms