RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ZNF596Q8TC21 504 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 CITED2Q99967 270 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-212ENST00000493940 PRSS22Q9GZN4 317 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 MMP28Q9H239 520 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 RCC2Q9P258 522 aaKnown RBP10.05□□□□□ -0.8
HSPG2-212ENST00000493940 PITPNC1Q9UKF7 332 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 TOR1AO14656 332 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 SLC31A2O15432 143 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 PRRX1P54821 245 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 NSUN5P1Q3KNT7 163 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 ABCA11PQ4W5N1 156 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 OR4K15Q8NH41 348 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 RBM14Q96PK6 669 aaKnown RBP10.04□□□□□ -0.8
HSPG2-212ENST00000493940 GFI1Q99684 422 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 SLC25A33Q9BSK2 321 aa10.04□□□□□ -0.8
HSPG2-212ENST00000493940 G3V4G9 280 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 MYL12BO14950 172 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 SC5DO75845 299 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 LPLP06858 475 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
HSPG2-212ENST00000493940 CD37P11049 281 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 GTF2F2P13984 249 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 RCC1P18754 421 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-212ENST00000493940 KCNJ3P48549 501 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 ZNF134P52741 427 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 TAS2R43P59537 309 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 GABPB1Q06547 395 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-212ENST00000493940 MED21Q13503 144 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 C2orf68Q2NKX9 166 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 MPV17LQ2QL34 196 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 AWAT2Q6E213 333 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 TMEM91Q6ZNR0 172 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 Q6ZPA2 131 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 GAPTQ8N292 157 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 OR56B4Q8NH76 319 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 ARL11Q969Q4 196 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 CPNE2Q96FN4 548 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-212ENST00000493940 Q96M66 194 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 TMED9Q9BVK6 235 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 SELENOIQ9C0D9 397 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 DUSP21Q9H596 190 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 LIN7BQ9HAP6 207 aa10.03□□□□□ -0.8
HSPG2-212ENST00000493940 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 LINC01548A6NM66 108 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 ZNF736B4DX44 427 aaPredicted RBP10.02□□□□□ -0.81
HSPG2-212ENST00000493940 C12orf77C9JDV5 145 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 FBXO24O75426 580 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 OR2F2O95006 317 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 MGMTP16455 207 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 GZMHP20718 246 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 MYF6P23409 242 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 VDAC2P45880 294 aaPredicted RBP10.02□□□□□ -0.81
HSPG2-212ENST00000493940 MAP2K4P45985 399 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 REG1BP48304 166 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 HNF4GQ14541 408 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 SPHARQ15513 63 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 SYT6Q5T7P8 510 aaPredicted RBP10.02□□□□□ -0.81
HSPG2-212ENST00000493940 RAB12Q6IQ22 244 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 CDH26Q8IXH8 852 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 ZNF439Q8NDP4 499 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 OR1L1Q8NH94 360 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 CAPSLQ8WWF8 208 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 TMEM203Q969S6 136 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 ST6GALNAC6Q969X2 333 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 FAM46BQ96A09 425 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 S100A13Q99584 98 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 ERGIC3Q9Y282 383 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 PEX16Q9Y5Y5 336 aa10.02□□□□□ -0.81
HSPG2-212ENST00000493940 A0A0A6YYD4 124 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 IGHV3-72A0A0B4J1Y9 119 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 TMEM30CPA0ZSE6 113 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 ERICH4A6NGS2 130 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 H0YHG0 523 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 ZNF780AO75290 641 aaPredicted RBP10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CRTAPO75718 401 aaPredicted RBP10.01□□□□□ -0.81
HSPG2-212ENST00000493940 PRB2P02812 416 aaPredicted RBP10.01□□□□□ -0.81
HSPG2-212ENST00000493940 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 BRS3P32247 399 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CEACAM3P40198 252 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 RPS25P62851 125 aaKnown RBP10.01□□□□□ -0.81
HSPG2-212ENST00000493940 QRFPP83859 136 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CD83Q01151 205 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 UNC119Q13432 240 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 MED22Q15528 200 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CT45A1Q5HYN5 189 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 C1orf100Q5SVJ3 147 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 LIPKQ5VXJ0 399 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CEACAM19Q7Z692 300 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 LINC00596Q86U02 117 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 OR10A7Q8NGE5 316 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CT45A3Q8NHU0 189 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 TOMM40LQ969M1 308 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 RPEQ96AT9 228 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 MND1Q9BWT6 205 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 GFOD1Q9NXC2 390 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 CKLFQ9UBR5 152 aa10.01□□□□□ -0.81
HSPG2-212ENST00000493940 A0A1W2PRX2 142 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms