RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 MAGEA5P43359 124 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 ESPL1Q14674 2120 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF324BQ6AW86 544 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 SNIP1Q8TAD8 396 aaKnown RBP13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 RIMS4Q9H426 269 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 ARHGAP21Q5T5U3 1957 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 TRBV6-6A0A0A6YYG2 114 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 TRAV24A0A0B4J272 114 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 A0A0G2JRQ6 117 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 C3orf80F5H4A9 247 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 ARR3P36575 388 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 RUNX1Q01196 453 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 HIKESHIQ53FT3 197 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 LINC00596Q86U02 117 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 HIST1H2AAQ96QV6 131 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 TTTY12Q9BZ98 90 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 PLK3Q9H4B4 646 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 IFT22Q9H7X7 185 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 BTBD17A6NE02 478 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 S100A6P06703 90 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 F2RP25116 425 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF154Q13106 437 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 RNPS1Q15287 305 aaKnown RBP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF880Q6PDB4 577 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 MALSU1Q96EH3 234 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 GNPNAT1Q96EK6 184 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 YPEL4Q96NS1 127 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 ZPBPQ9BS86 351 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 KIAA1456Q9P272 454 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 PUS1Q9Y606 427 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 HS3ST1O14792 307 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 CEACAM1P13688 526 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 CBR1P16152 277 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF14P17017 642 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 MAS1LP35410 378 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 RPS23P62266 143 aaKnown RBP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 ABHD17BQ5VST6 288 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 RBMS3Q6XE24 437 aaKnown RBP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF295-AS1Q8N0V1 137 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 RDH5Q92781 318 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 OR2W1Q9Y3N9 320 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 DNAJC13O75165 2243 aa13.74□□□□□ -0.21
SEMA4D-220ENST00000492386 C9orf172C9J069 976 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 ITGA3P26006 1051 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 WNT5AP41221 380 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 B2MP61769 119 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 S100A12P80511 92 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 OR1C1Q15619 314 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 OPA3Q9H6K4 179 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 KIAA1324LA8MWY0 1029 aaPredicted RBP13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 SRP19P09132 144 aaKnown RBP13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 IL24Q13007 206 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 LPAL2Q16609 132 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 FAM58AQ8N1B3 248 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 C17orf78Q8N4C9 275 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 TMEM251Q8N6I4 163 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 ATP5SQ99766 215 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 DDA1Q9BW61 102 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 PLA2G3Q9NZ20 509 aa13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
SEMA4D-220ENST00000492386 OR5B21A6NL26 309 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 ANKRD30BLA7E2S9 258 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 WRBO00258 174 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 PLP2Q04941 152 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 HAGHQ16775 308 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 ADAM5Q6NVV9 412 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF573Q86YE8 665 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 OR10J5Q8NHC4 309 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 DOCK7Q96N67 2140 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 CABLES2Q9BTV7 478 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 HIPK2Q9H2X6 1198 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 FOXJ2Q9P0K8 574 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 MPC1Q9Y5U8 109 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 LIPGQ9Y5X9 500 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 S100A8P05109 93 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 GNG3P63215 75 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 ICAM4Q14773 271 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 OR8G1Q15617 311 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 C3AR1Q16581 482 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 OR51H1Q8NH63 302 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 STRADBQ9C0K7 418 aa13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 ERRFI1Q9UJM3 462 aaPredicted RBP13.72□□□□□ -0.21
SEMA4D-220ENST00000492386 AHCTF1Q8WYP5 2266 aa13.71□□□□□ -0.21
SEMA4D-220ENST00000492386 A0A1B0GU03 582 aa13.71□□□□□ -0.21
SEMA4D-220ENST00000492386 ARGFXA6NJG6 315 aa13.71□□□□□ -0.21
SEMA4D-220ENST00000492386 H3BQ15 152 aa13.71□□□□□ -0.21
SEMA4D-220ENST00000492386 RHBDL1O75783 438 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms