RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PAHP00439 452 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 ZNF182P17025 639 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 SCAND1P57086 179 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 UNC119Q13432 240 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 GRK1Q15835 563 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 PAN3Q58A45 887 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 MZT2AQ6P582 158 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 OR56B1Q8NGI3 324 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 ACOT12Q8WYK0 555 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 Q96M66 194 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 RBM38Q9H0Z9 239 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 MEGF9Q9H1U4 602 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 ATG5Q9H1Y0 275 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 BATF3Q9NR55 127 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 COMMD3Q9UBI1 195 aa10.29□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A10PA6NDY2 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A18PA6NE21 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A16PA6NEW6 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A20PA6NIJ5 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A8PA6NJQ4 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A7PA6NKC0 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A22PA8MWA6 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A12PA8MX19 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A5PA8MXJ8 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A23PA8MXZ1 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 MCRIP1C9JLW8 97 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 H3BUX3 64 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 PSPNO60542 156 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A15PP0C7V4 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A13PP0C7W8 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A14PP0C7W9 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FAM90A24PP0C7X0 464 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 RAB6AP20340 208 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 COX7A1P24310 79 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 VEGFCP49767 419 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 EDDM3BP56851 147 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 QRFPP83859 136 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 EDDM3AQ14507 147 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 NKAPLQ5M9Q1 402 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 SLC35E4Q6ICL7 350 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 ZNF782Q6ZMW2 699 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 GDPD3Q7L5L3 318 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 LHFPL4Q7Z7J7 247 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 OR8H2Q8N162 312 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 OR5R1Q8NH85 324 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 SNX22Q96L94 193 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 SSX3Q99909 188 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 DCUN1D5Q9BTE7 237 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 BARHL1Q9BZE3 327 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 CHST6Q9GZX3 395 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 PPA2Q9H2U2 334 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 SEBOXQ9HB31 216 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 ING3Q9NXR8 418 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FBLN5Q9UBX5 448 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 PEX16Q9Y5Y5 336 aa10.28□□□□□ -0.76
SEC61A1-206ENST00000491668 FUOMA2VDF0 154 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 ODF3BA8MYP8 253 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 SLC33A1O00400 549 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 RGS5O15539 181 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 CHST1O43916 411 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 PDCD6O75340 191 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 FUT3P21217 361 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 BLVRBP30043 206 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 EFNB2P52799 333 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 RBM39Q14498 530 aaKnown RBP10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 LY6EQ16553 131 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 DHRS7BQ6IAN0 325 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 RAB12Q6IQ22 244 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 Q6P435 159 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 TPRX1Q8N7U7 411 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 SUMF2Q8NBJ7 301 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 OR4S1Q8NGB4 309 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 DYNC2LI1Q8TCX1 351 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 PTX4Q96A99 478 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 NICN1Q9BSH3 213 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 DPCDQ9BVM2 203 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 TM2D1Q9BX74 207 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 LPAR5Q9H1C0 372 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 PLEKHJ1Q9NW61 149 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 RHBDL2Q9NX52 303 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 CCDC59Q9P031 241 aaKnown RBP10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 SPATA2Q9UM82 520 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 SIGLEC9Q9Y336 463 aa10.27□□□□□ -0.77
SEC61A1-206ENST00000491668 TRAV24A0A0B4J272 114 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 BTBD17A6NE02 478 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 MGST3O14880 152 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 LDLRAD4O15165 306 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 SCGNO76038 276 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 ZNF728P0DKX0 622 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 LMO1P25800 156 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 OR3A1P47881 315 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 MRPS15P82914 257 aaKnown RBP10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 PLA2G7Q13093 441 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 ATXN7L3Q14CW9 347 aaPredicted RBP10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 AANATQ16613 207 aa10.26□□□□□ -0.77
SEC61A1-206ENST00000491668 LRRC75BQ2VPJ9 315 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms