RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SLC51BQ86UW2 128 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 DOLPP1Q86YN1 238 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 C1orf87Q8N0U7 546 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 GAPTQ8N292 157 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 SUMF2Q8NBJ7 301 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CLEC18CQ8NCF0 446 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ST6GALNAC3Q8NDV1 305 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 OR8H1Q8NGG4 311 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CASTOR1Q8WTX7 329 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 RTN4IP1Q8WWV3 396 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 S100PBPQ96BU1 408 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 C2orf50Q96LR7 162 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CABLES2Q9BTV7 478 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 RSRP1Q9BUV0 290 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CHIAQ9BZP6 476 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 EGLN1Q9GZT9 426 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 MFFQ9GZY8 342 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 C5orf66Q9H5L9 145 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ESRP2Q9H6T0 727 aaKnown RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 HES4Q9HCC6 221 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 COQ3Q9NZJ6 369 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 JKAMPQ9P055 326 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 IL19Q9UHD0 177 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 UBQLN2Q9UHD9 624 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 LAMP3Q9UQV4 416 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 MED12Q93074 2177 aa5.4□□□□□ -1.55
SF3A3-208ENST00000489537 DNAJC13O75165 2243 aa5.4□□□□□ -1.55
SF3A3-208ENST00000489537 LRRK2Q5S007 2527 aa5.4□□□□□ -1.55
SF3A3-208ENST00000489537 SHANK1Q9Y566 2161 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF407Q9C0G0 2248 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 USP9YO00507 2555 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TRBV6-7A0A0A0MS04 114 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 OOEPA6NGQ2 149 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 M0R1B8 84 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 CDIPTO14735 213 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TMPRSS2O15393 492 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 SPINT2O43291 252 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 HSPA12AO43301 675 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TOXO94900 526 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 HAND1O96004 215 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 IRF2P14316 349 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 MUC1P15941 1255 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 GZMHP20718 246 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 BMP5P22003 454 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 UQCRFS1P47985 274 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 NPBWR2P48146 333 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 ASCL1P50553 236 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 FABP6P51161 128 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 NKX2-5P52952 324 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 H2BFSP57053 126 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 PIGPP57054 158 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 HLA-DRB3P79483 266 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 SORDQ00796 357 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 OPCMLQ14982 345 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TESK1Q15569 626 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 FBXL19-AS1Q494R0 122 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 PRR30Q53SZ7 412 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 SPATA46Q5T0L3 261 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 THOC7Q6I9Y2 204 aaKnown RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TEX261Q6UWH6 196 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF497Q6ZNH5 498 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 CISD2Q8N5K1 135 aaKnown RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 OR5T2Q8NGG2 359 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 MRPL24Q96A35 216 aaKnown RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 GALMQ96C23 342 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 SNRNP40Q96DI7 357 aaKnown RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 ELMOD3Q96FG2 381 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 RTBDNQ9BSG5 229 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TOLLIPQ9H0E2 274 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 FXYD6Q9H0Q3 95 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 FAM234AQ9H0X4 552 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 DNTTIP1Q9H147 329 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 WDR13Q9H1Z4 485 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 MS4A5Q9H3V2 200 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 NAA60Q9H7X0 242 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 PLEKHA2Q9HB19 425 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM165Q9HC07 324 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 SLC2A9Q9NRM0 540 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 CRIM1Q9NZV1 1036 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 PIPOXQ9P0Z9 390 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 ELF5Q9UKW6 265 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-208ENST00000489537 TRAPPC2LQ9UL33 140 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 OR2W1Q9Y3N9 320 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 WIPI2Q9Y4P8 454 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 U3KQ87 197 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 ICE1Q9Y2F5 2266 aa5.39□□□□□ -1.55
SF3A3-208ENST00000489537 C13orf42A0A1B0GVH6 325 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 hCG_1807616A0A1W2PRN6 198 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 FAM25EA8MYX2 175 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SLC33A1O00400 549 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SDCBPO00560 298 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 MGST3O14880 152 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 MPPED1O15442 326 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 NDUFA2O43678 99 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SYNGR1O43759 233 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ATP6V1G1O75348 118 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 TUSC2O75896 110 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 OR2H2O95918 312 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 GRPP07492 148 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms