RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SIGIRRQ6IA17 410 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 RAB12Q6IQ22 244 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 SFXN4Q6P4A7 337 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 TCF23Q7RTU1 214 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 ANKRD13BQ86YJ7 626 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 KIR3DL3Q8N743 410 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 SUMF2Q8NBJ7 301 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 NEK7Q8TDX7 302 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 CYYR1Q96J86 154 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 WDFY2Q96P53 400 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 DPCDQ9BVM2 203 aaPredicted RBP7.47□□□□□ -1.21
SMC4-213ENST00000472282 LPAR5Q9H1C0 372 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 SIRT7Q9NRC8 400 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 TNFRSF19Q9NS68 423 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 RCC2Q9P258 522 aaKnown RBP7.47□□□□□ -1.21
SMC4-213ENST00000472282 DAPK2Q9UIK4 370 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 KPTNQ9Y664 436 aa7.47□□□□□ -1.21
SMC4-213ENST00000472282 CENPVL3A0A0U1RRI6 287 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 FUOMA2VDF0 154 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 LDLRAD4O15165 306 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 PDCD6O75340 191 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 MDKP21741 143 aaPredicted RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 ERP29P30040 261 aaKnown RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 RANBP1P43487 201 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 RPL5P46777 297 aaKnown RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 GLIPR1P48060 266 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 EFNB2P52799 333 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 DLX1P56177 255 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 PRB3Q04118 309 aaPredicted RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 FOXL1Q12952 345 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 IDNKQ5T6J7 187 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 RSBN1Q5VWQ0 802 aaPredicted RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 TMEM200BQ69YZ2 307 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 VMO1Q7Z5L0 202 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 TRAPPC6BQ86SZ2 158 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 CLVS1Q8IUQ0 354 aaPredicted RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 CMTM4Q8IZR5 234 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 Q8N7P7 452 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 LGALS14Q8TCE9 139 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 DYRK2Q92630 601 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 URM1Q9BTM9 101 aaKnown RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 ZNF747Q9BV97 191 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 TM2D1Q9BX74 207 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 UNKLQ9H9P5 680 aaKnown RBP7.46□□□□□ -1.22
SMC4-213ENST00000472282 SPACA1Q9HBV2 294 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 KIF25Q9UIL4 384 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 PEX16Q9Y5Y5 336 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 LINC00312Q9Y6C7 94 aa7.46□□□□□ -1.22
SMC4-213ENST00000472282 MEIKINA0A087WXM9 373 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 A0A1W2PPH5 198 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 hADV38S2A0JD32 116 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 ODAMA1E959 279 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 UBE2QL1A1L167 161 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 MCRIP1C9JLW8 97 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 CLDN34H7C241 214 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 M0R1W7 72 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 PAHP00439 452 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 IL1AP01583 271 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 ZNF728P0DKX0 622 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 FUT3P21217 361 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 CHATP28329 748 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 RPS19P39019 145 aaKnown RBP7.45□□□□□ -1.22
SMC4-213ENST00000472282 GLP1RP43220 463 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 KCNJ3P48549 501 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 VEGFCP49767 419 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 DLX6P56179 175 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 MEF2CQ06413 473 aaPredicted RBP7.45□□□□□ -1.22
SMC4-213ENST00000472282 SRSF4Q08170 494 aaKnown RBP7.45□□□□□ -1.22
SMC4-213ENST00000472282 KLRD1Q13241 179 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 BLMHQ13867 455 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 CTF1Q16619 201 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 RTN4RL2Q86UN3 420 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 PDZD9Q8IXQ8 264 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 LHX4Q969G2 390 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 ZNF714Q96N38 554 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 NEDD4LQ96PU5 975 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 BARHL1Q9BZE3 327 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 ZMAT3Q9HA38 289 aaKnown RBP7.45□□□□□ -1.22
SMC4-213ENST00000472282 ETAA1Q9NY74 926 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 FBLN5Q9UBX5 448 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 RAB22AQ9UL26 194 aa7.45□□□□□ -1.22
SMC4-213ENST00000472282 TRGV10A0A0A0MS01 117 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 TRAV39A0A0B4J263 110 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 TMEM30CPA0ZSE6 113 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 C17orf98A8MV24 154 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 SOCS1O15524 211 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 CLPXO76031 633 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 MELTFP08582 738 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 BLVRBP30043 206 aaPredicted RBP7.44□□□□□ -1.22
SMC4-213ENST00000472282 GDNFP39905 211 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 ERVFRD-1P60508 538 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 PAX5Q02548 391 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 RBM39Q14498 530 aaKnown RBP7.44□□□□□ -1.22
SMC4-213ENST00000472282 GPR157Q5UAW9 335 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 SLC35E4Q6ICL7 350 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 C16orf87Q6PH81 154 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 Q6YL49 198 aa7.44□□□□□ -1.22
SMC4-213ENST00000472282 ZNF782Q6ZMW2 699 aaPredicted RBP7.44□□□□□ -1.22
SMC4-213ENST00000472282 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms