RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MADCAM1Q13477 382 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 RBM48Q5RL73 367 aaKnown RBP8.14□□□□□ -1.11
SF3A3-204ENST00000462258 ZNF497Q6ZNH5 498 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 Q6ZS46 218 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 LYPD6Q86Y78 171 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 CDH26Q8IXH8 852 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 OR10A7Q8NGE5 316 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 OR10X1Q8NGY0 326 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 RFESDQ8TAC1 157 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 SGCDQ92629 289 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 MRPS24Q96EL2 167 aaKnown RBP8.14□□□□□ -1.11
SF3A3-204ENST00000462258 UQCC2Q9BRT2 126 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 TMED9Q9BVK6 235 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 WNT10AQ9GZT5 417 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 LSM2Q9Y333 95 aaKnown RBP8.14□□□□□ -1.11
SF3A3-204ENST00000462258 A0A1W2PPI3 338 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 ERICH4A6NGS2 130 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 C15orf65H3BRN8 121 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 SDCBPO00560 298 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-204ENST00000462258 CRTAPO75718 401 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-204ENST00000462258 CD28P10747 220 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 GPR50Q13585 617 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 INSL4Q14641 139 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 SPHARQ15513 63 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 MED22Q15528 200 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 FAM27D1Q5T7N8 215 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 RAB12Q6IQ22 244 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 LYG1Q8N1E2 194 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 MS4A15Q8N5U1 240 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 TMEM104Q8NE00 496 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 OR56B4Q8NH76 319 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 UBALD1Q8TB05 177 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 WIPF2Q8TF74 440 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-204ENST00000462258 CCDC107Q8WV48 283 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 UFD1Q92890 307 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 ARL11Q969Q4 196 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 FAM46BQ96A09 425 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 Q96M66 194 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 RBM14Q96PK6 669 aaKnown RBP8.13□□□□□ -1.11
SF3A3-204ENST00000462258 ANKRD60Q9BZ19 345 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 SELENOIQ9C0D9 397 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 VCX3BQ9H321 246 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 BANF2Q9H503 90 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 ETAA1Q9NY74 926 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 MOB4Q9Y3A3 225 aa8.13□□□□□ -1.11
SF3A3-204ENST00000462258 IGHV3-43A0A0B4J1X8 118 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 A0A1W2PPE3 182 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A10PA6NDY2 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A18PA6NE21 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A16PA6NEW6 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A20PA6NIJ5 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A7PA6NKC0 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A12PA8MX19 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A5PA8MXJ8 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A23PA8MXZ1 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 C12orf77C9JDV5 145 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 MCRIP1C9JLW8 97 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 HSD17B6O14756 317 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 RGS10O43665 173 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 ORC5O43913 435 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 SNRNP70P08621 437 aaKnown RBP8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A15PP0C7V4 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A13PP0C7W8 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A14PP0C7W9 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A24PP0C7X0 464 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 FAM106CPP0CH98 169 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 IGHV3-43DP0DP04 118 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 GZMHP20718 246 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 MYF6P23409 242 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 RAB7AP51149 207 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 DIAPH2-AS1Q14236 149 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 IRF3Q14653 427 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 NSUN5P1Q3KNT7 163 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 ABCA11PQ4W5N1 156 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 ACSM3Q53FZ2 586 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 HSD17B12Q53GQ0 312 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 C6orf183Q5T699 404 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 SLC16A12Q6ZSM3 486 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 NDUFA11Q86Y39 141 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 OR8H3Q8N146 312 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 DRAM1Q8N682 238 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 PHYHIPQ92561 330 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 CITED2Q99967 270 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-204ENST00000462258 OCSTAMPQ9BR26 566 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 CST11Q9H112 138 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 GHRLQ9UBU3 117 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 TPRKBQ9Y3C4 175 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 PEX16Q9Y5Y5 336 aa8.12□□□□□ -1.11
SF3A3-204ENST00000462258 PLXNB1O43157 2135 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 SH2D7A6NKC9 451 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-204ENST00000462258 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 H0YHG0 523 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 M0QZK8 103 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 SC5DO75845 299 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 MPIG6BO95866 241 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 MT-ND4P03905 459 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 OPN1MWP04001 364 aa8.11□□□□□ -1.11
SF3A3-204ENST00000462258 AMY1AP04745 511 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms