RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ZNF565Q8N9K5 539 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 UBALD1Q8TB05 177 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 MAFIPQ8WZ33 124 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 CORO2AQ92828 525 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 FAHD2AQ96GK7 314 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 TAS2R3Q9NYW6 316 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 CALYQ9NYX4 217 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 KCNIP1Q9NZI2 227 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 ZNF230Q9UIE0 474 aaPredicted RBP8.37□□□□□ -1.07
UPF2-204ENST00000460569 KCNS2Q9ULS6 477 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 KBTBD11-OT1A0A1B0GTJ5 212 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 hCG_1809904A0A1W2PP81 198 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 A0A1W2PPE2 198 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 A0A1W2PR64 198 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 A0A1W2PRV1 198 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 MEIOCA2RUB1 952 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 FABP12A6NFH5 140 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 C12orf77C9JDV5 145 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 J3QLI3 93 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 M0R1W7 72 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 TOX4O94842 621 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 FOSL1P15407 271 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 OMGP23515 440 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 DTYMKP23919 212 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 DLX6P56179 175 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 HLA-DRB3P79483 266 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 LTC4SQ16873 150 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 C17orf58Q2M2W7 97 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 PRAMEF5Q5TYX0 476 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 PYHIN1Q6K0P9 492 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 ZNF880Q6PDB4 577 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 ZNF782Q6ZMW2 699 aaPredicted RBP8.36□□□□□ -1.07
UPF2-204ENST00000460569 CCDC190Q86UF4 302 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 C15orf40Q8WUR7 153 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 ARL11Q969Q4 196 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 DMRTB1Q96MA1 342 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 ABHD1Q96SE0 405 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 SMR3AQ99954 134 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 PCGF1Q9BSM1 259 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 SIRPDQ9H106 197 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 C7orf69Q9H7B7 122 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 TAF9BQ9HBM6 251 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 Q9N2K0 584 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 IFT46Q9NQC8 304 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 SIRT7Q9NRC8 400 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
UPF2-204ENST00000460569 RABL2AQ9UBK7 228 aaPredicted RBP8.36□□□□□ -1.07
UPF2-204ENST00000460569 OPN4Q9UHM6 478 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 MGAT4AQ9UM21 535 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 RABL2BQ9UNT1 228 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 KPTNQ9Y664 436 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
UPF2-204ENST00000460569 TLN2Q9Y4G6 2542 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 POM121CA8CG34 1229 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 C17orf98A8MV24 154 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 C15orf65H3BRN8 121 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 SPINT2O43291 252 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 ORC5O43913 435 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 TPPPO94811 219 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 LY6G6DO95868 133 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 RBP4P02753 201 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 FCER2P06734 321 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 LPLP06858 475 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 GZMHP20718 246 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 KIR2DS4P43632 304 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 CBX5P45973 191 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 ERVFRD-1P60508 538 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 PRB3Q04118 309 aaPredicted RBP8.35□□□□□ -1.07
UPF2-204ENST00000460569 PAX8Q06710 450 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 KIR2DS1Q14954 304 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 HMGN3Q15651 99 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 CR1LQ2VPA4 569 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 CLEC9AQ6UXN8 241 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 VMO1Q7Z5L0 202 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 C5orf24Q7Z6I8 188 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 ZNF554Q86TJ5 538 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 GVQW1Q8N7I0 195 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 Q8N7P7 452 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 OR1L1Q8NH94 360 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 RFESDQ8TAC1 157 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 GPX8Q8TED1 209 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 IL1F10Q8WWZ1 152 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 ST6GALNAC5Q9BVH7 336 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 TMPRSS13Q9BYE2 586 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 METTL8Q9H825 291 aaKnown RBP8.35□□□□□ -1.07
UPF2-204ENST00000460569 SCPEP1Q9HB40 452 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 ZNF286AQ9HBT8 521 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 RAB9BQ9NP90 201 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 IDI2-AS1Q9NZ38 188 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 AUP1Q9Y679 476 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 V9GYH0 126 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 AKAP9Q99996 3911 aa8.35□□□□□ -1.07
UPF2-204ENST00000460569 F8P00451 2351 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 IGHV3-43A0A0B4J1X8 118 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 FAM172BPA6NC97 362 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 A8MV72 311 aaPredicted RBP8.34□□□□□ -1.07
UPF2-204ENST00000460569 TRDCB7Z8K6 153 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms