RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 H3BNC9 293 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 MRPL33O75394 65 aaKnown RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 FKBP2P26885 142 aaKnown RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 TMEM70Q9BUB7 260 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 QTRT1Q9BXR0 403 aaKnown RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 C6orf106Q9H6K1 298 aaPredicted RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 WNK3Q9BYP7 1800 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 H0YIZ8 118 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 MPZL1O95297 269 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 HBZP02008 142 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 NTSR1P30989 418 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 DCDP81605 110 aaKnown RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 PLGLAQ15195 96 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 RTL8BQ17RB0 113 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 TMEM52BQ4KMG9 183 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 CLEC2AQ6UVW9 174 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 PNKDQ8N490 385 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 OR10V1Q8NGI7 309 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 OR5A2Q8NGI9 324 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 SARGQ9BW04 601 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 C4orf47A7E2U8 309 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 SERF1AO75920 110 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 MZT1Q08AG7 82 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 CXorf66Q5JRM2 361 aaPredicted RBP9.04□□□□□ -0.96
LIN54-202ENST00000442461 TMEM136Q6ZRR5 245 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 LAMB1P07942 1786 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 PRAMEF26H0Y7S4 382 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 MGAT2Q10469 447 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 CST9Q5W186 159 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 VASH2Q86V25 355 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 CA13Q8N1Q1 262 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 DIRC2Q96SL1 478 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 NRN1Q9NPD7 142 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 WBP1LQ9NX94 342 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 POLDIP2Q9Y2S7 368 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 SEC16AO15027 2179 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 BCORQ6W2J9 1755 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 MYO9BQ13459 2157 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 STAG3L3P0CL85 134 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 PSMB2P49721 201 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 EIF3IQ13347 325 aaKnown RBP9.04□□□□□ -0.96
LIN54-202ENST00000442461 MRPL58Q14197 206 aaKnown RBP9.04□□□□□ -0.96
LIN54-202ENST00000442461 C9orf135Q5VTT2 229 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 SPPL3Q8TCT6 385 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 TAF15Q92804 592 aaKnown RBP eCLIP9.04□□□□□ -0.96
LIN54-202ENST00000442461 MARS2Q96GW9 593 aaKnown RBP9.04□□□□□ -0.96
LIN54-202ENST00000442461 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 B3GAT1Q9P2W7 334 aa9.04□□□□□ -0.96
LIN54-202ENST00000442461 UBR2Q8IWV8 1755 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 G6PCP35575 357 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 PSG5Q15238 335 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 MMD2Q8IY49 270 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 VN1R2Q8NFZ6 395 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 OR4P4Q8NGL7 312 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 CLDND2Q8NHS1 167 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
LIN54-202ENST00000442461 TMEM186Q96B77 213 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 OXGR1Q96P68 337 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 OR8B2Q96RD0 313 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 CCL28Q9NRJ3 127 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 TOPAZ1Q8N9V7 1692 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 H3BMH7 237 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 SH2D1BO14796 132 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 PRKNO60260 465 aaPredicted RBP9.03□□□□□ -0.96
LIN54-202ENST00000442461 CDAP32320 146 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 RABIFP47224 123 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 CKS1BP61024 79 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 SRYQ05066 204 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 HYAL1Q12794 435 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 RTP5Q14D33 572 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 OR8B8Q15620 311 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 ZNF141Q15928 474 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 SMIM21Q3B7S5 101 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 EDARADDQ8WWZ3 215 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 UBTD1Q9HAC8 227 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 PTPRFP10586 1907 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 DHHO43323 396 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 SLC25A5P05141 298 aaKnown RBP9.03□□□□□ -0.96
LIN54-202ENST00000442461 SMIM13P0DJ93 91 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 HMGA1P17096 107 aaKnown RBP9.03□□□□□ -0.96
LIN54-202ENST00000442461 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.03□□□□□ -0.96
LIN54-202ENST00000442461 OR52M1Q8NGK5 317 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 OR2K2Q8NGT1 345 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 ZPLD1Q8TCW7 415 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 KISS1RQ969F8 398 aaPredicted RBP9.03□□□□□ -0.96
LIN54-202ENST00000442461 GUCD1Q96NT3 240 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 IMMP2LQ96T52 175 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 FAM206AQ9NX38 181 aa9.03□□□□□ -0.96
LIN54-202ENST00000442461 OR4C46A6NHA9 309 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 SRSF9Q13242 221 aaKnown RBP eCLIP9.02□□□□□ -0.96
LIN54-202ENST00000442461 TRA2AQ13595 282 aaKnown RBP eCLIP9.02□□□□□ -0.96
LIN54-202ENST00000442461 ICAM4Q14773 271 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 OCIAD2Q56VL3 154 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 FAM169BQ8N8A8 192 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 OR8B12Q8NGG6 310 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 OR4S2Q8NH73 311 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms