RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 MRPS10P82664 201 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 SRYQ05066 204 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 SRSF4Q08170 494 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 FOXF1Q12946 379 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 MLLT11Q13015 90 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CRMP1Q14194 572 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF345Q14585 488 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CDSNQ15517 529 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM241Q24JQ0 296 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 BSXQ3C1V8 233 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR52W1Q6IF63 320 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR4A47Q6IF82 309 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 EIF5AL1Q6IS14 154 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 FAHD2BQ6P2I3 314 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF585AQ6P3V2 769 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CNIH2Q6PI25 160 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CD200R1LQ6Q8B3 271 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ALKAL2Q6UX46 152 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DRAM2Q6UX65 266 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CLEC18BQ6UXF7 455 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 FBXW12Q6X9E4 464 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 C19orf35Q6ZS72 473 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 GRINAQ7Z429 371 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM179BQ7Z7N9 219 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 GLCCI1Q86VQ1 547 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 IFNEQ86WN2 208 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DOLPP1Q86YN1 238 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 WDFY1Q8IWB7 410 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 BAP18Q8IXM2 172 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 HIST3H2BBQ8N257 126 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 FGFRL1Q8N441 504 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM99Q8N816 258 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CLEC18CQ8NCF0 446 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR2AK2Q8NG84 335 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR9G4Q8NGQ1 327 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR51A7Q8NH64 312 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TERB2Q8NHR7 220 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 NEIL3Q8TAT5 605 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 RNF128Q8TEB7 428 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 GALNT14Q96FL9 552 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 FAHD2AQ96GK7 314 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 RHNO1Q9BSD3 238 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TLNRD1Q9H1K6 362 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 HIPK2Q9H2X6 1198 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 SEC61A2Q9H9S3 476 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 NOX3Q9HBY0 568 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 KRCC1Q9NPI7 259 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 PNRC2Q9NPJ4 139 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 UBQLN4Q9NRR5 601 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 NAGKQ9UJ70 344 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 IKZF2Q9UKS7 526 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 LAMP3Q9UQV4 416 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF835Q9Y2P0 537 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 FAM215AQ9Y5M1 114 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DNAJC13O75165 2243 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 PTPN13Q12923 2485 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DOPEY1Q5JWR5 2465 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ASH1LQ9NR48 2969 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DOPEY2Q9Y3R5 2298 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ADGRG4Q8IZF6 3080 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 USP9YO00507 2555 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 IGLV3-32A0A0A0MS00 114 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 KIR2DL5BA0A0G2JN68 375 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 KIR2DL5BA0A0G2JPC4 375 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 A0A1W2PP11 408 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 A0A1W2PQD3 144 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SERINC4A6NH21 518 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OR5H1A6NKK0 313 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF587BE7ETH6 402 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 H0YL77 283 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF593O00488 134 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 TGOLN2O43493 480 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 GSTZ1O43708 216 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OR10H3O60404 316 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ZIC3O60481 467 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SIX6O95475 246 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 GCGP01275 180 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OPN1SWP03999 348 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SEMG1P04279 462 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ALDOBP05062 364 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 NGFRP08138 427 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 RD3LP0DJH9 198 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 HLA-GP17693 338 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 TBPP20226 339 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 CFPP27918 469 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SHC1P29353 583 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 AQP1P29972 269 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 CDC34P49427 236 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SELENOPP49908 381 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 LHX2P50458 406 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 CDH12P55289 794 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 DSCR4P56555 118 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 CLDN18P56856 261 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 B3GALT5-AS1P59052 145 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 UBE2G2P60604 165 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ERVFC1-1P60608 527 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 CDK6Q00534 326 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 FOXL1Q12952 345 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 RGNQ15493 299 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms