RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 A0A1B0GWJ7 208 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 SCGB1D2O95969 90 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 KLF3P57682 345 aaPredicted RBP17.47■□□□□ 0.39
USP39-203ENST00000409470 PRR30Q53SZ7 412 aaPredicted RBP17.47■□□□□ 0.39
USP39-203ENST00000409470 LDLRAD3Q86YD5 345 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 CMTM1Q8IZ96 169 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 H1FOOQ8IZA3 346 aaPredicted RBP17.47■□□□□ 0.39
USP39-203ENST00000409470 CNTNAP3BQ96NU0 1288 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 CNTNAP3Q9BZ76 1288 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 ASF1BQ9NVP2 202 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 ATMQ13315 3056 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 ZGRF1Q86YA3 2104 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 ATP6V1G2-DDX39BF2Z307 99 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 PSPNO60542 156 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 IGHV3-13P01766 116 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 SRPXP78539 464 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 SMIM21Q3B7S5 101 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 OR1A1Q9P1Q5 309 aa17.46■□□□□ 0.39
USP39-203ENST00000409470 PIEZO2Q9H5I5 2752 aa17.46■□□□□ 0.38
USP39-203ENST00000409470 HSPA12AO43301 675 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 NMBP08949 121 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 NKX6-1P78426 367 aaPredicted RBP17.45■□□□□ 0.38
USP39-203ENST00000409470 TMEM268Q5VZI3 342 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 LHFPL5Q8TAF8 219 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 LRRC29Q8WV35 223 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 TMEM222Q9H0R3 208 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 DNAJB11Q9UBS4 358 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 ERRFI1Q9UJM3 462 aaPredicted RBP17.45■□□□□ 0.38
USP39-203ENST00000409470 LSM5Q9Y4Y9 91 aaKnown RBP17.45■□□□□ 0.38
USP39-203ENST00000409470 MSGN1A6NI15 193 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 RRASP10301 218 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 LMO1P25800 156 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 S100GP29377 79 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 C22orf34Q6ZV56 151 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 SLC35G3Q8N808 338 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 AQP10Q96PS8 301 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 GPHA2Q96T91 129 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 ZNF835Q9Y2P0 537 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 TMED3Q9Y3Q3 217 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 WIPI2Q9Y4P8 454 aa17.45■□□□□ 0.38
USP39-203ENST00000409470 TMEM30CPA0ZSE6 113 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 ZSCAN5BA6NJL1 495 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 C1QTNF9BB2RNN3 333 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 PTBP3O95758 552 aaKnown RBP17.44■□□□□ 0.38
USP39-203ENST00000409470 CD200P41217 278 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 RPS23P62266 143 aaKnown RBP17.44■□□□□ 0.38
USP39-203ENST00000409470 ZNF695Q8IW36 515 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 UBALD1Q8TB05 177 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 TAF9BQ9HBM6 251 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 ZC4H2Q9NQZ6 224 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 MBNL3Q9NUK0 354 aaKnown RBP17.44■□□□□ 0.38
USP39-203ENST00000409470 ELOVL5Q9NYP7 299 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 BSNQ9UPA5 3926 aa17.44■□□□□ 0.38
USP39-203ENST00000409470 NPIPB11E5RHQ5 1161 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 C16orf97H3BN30 126 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 TNFSF12O43508 249 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 C1QTNF12Q5T7M4 302 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 RELL2Q8NC24 303 aaPredicted RBP17.43■□□□□ 0.38
USP39-203ENST00000409470 PRR7Q8TB68 274 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 TMEM171Q8WVE6 324 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 KCNIP1Q9NZI2 227 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 RAXQ9Y2V3 346 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 CADP27708 2225 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 ARID1AO14497 2285 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 DEDDO75618 318 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 TFF1P04155 84 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 CD40P25942 277 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 CCKARP32238 428 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 UCNP55089 124 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 RBPJQ06330 500 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 PDZD9Q8IXQ8 264 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 OR10V1Q8NGI7 309 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 PHYHIPLQ96FC7 376 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 CXorf58Q96LI9 332 aa17.43■□□□□ 0.38
USP39-203ENST00000409470 PTPRQQ9UMZ3 2332 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 SELENOVP59797 346 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 AESQ08117 197 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 HMGN3Q15651 99 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 GALNT11Q8NCW6 608 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 OR2V2Q96R30 315 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 RBM7Q9Y580 266 aaKnown RBP17.42■□□□□ 0.38
USP39-203ENST00000409470 SPRY3O43610 288 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 PGLYRP1O75594 196 aaPredicted RBP17.42■□□□□ 0.38
USP39-203ENST00000409470 MBPP02686 304 aaPredicted RBP17.42■□□□□ 0.38
USP39-203ENST00000409470 COL10A1Q03692 680 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 FAM74A1Q5RGS3 127 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 SLC35E4Q6ICL7 350 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 TMEM56Q96MV1 263 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 USB1Q9BQ65 265 aaKnown RBP17.42■□□□□ 0.38
USP39-203ENST00000409470 SLC25A32Q9H2D1 315 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 TMEM56-RWDD3S4R434 201 aa17.42■□□□□ 0.38
USP39-203ENST00000409470 K7EPK0 472 aa17.41■□□□□ 0.38
USP39-203ENST00000409470 IFNL4K9M1U5 179 aa17.41■□□□□ 0.38
USP39-203ENST00000409470 TPT1P13693 172 aaKnown RBP17.41■□□□□ 0.38
USP39-203ENST00000409470 FAM71E2Q8N5Q1 922 aa17.41■□□□□ 0.38
USP39-203ENST00000409470 BOLLQ8N9W6 283 aaKnown RBP17.41■□□□□ 0.38
USP39-203ENST00000409470 BVESQ8NE79 360 aa17.41■□□□□ 0.38
USP39-203ENST00000409470 OR52M1Q8NGK5 317 aa17.41■□□□□ 0.38
USP39-203ENST00000409470 DNTTIP1Q9H147 329 aa17.41■□□□□ 0.38
USP39-203ENST00000409470 IGLV3-9A0A075B6K5 115 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms