RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FAM118AQ9NWS6 357 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 CHCHD3Q9NX63 227 aaKnown RBP12.86□□□□□ -0.35
CHMP3-203ENST00000409225 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 IGHV4OR15-8A0A075B7B6 117 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 A0A087WW49 117 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 RBMY1BA6NDE4 496 aaKnown RBP12.85□□□□□ -0.35
CHMP3-203ENST00000409225 RBMY1EA6NEQ0 496 aaKnown RBP12.85□□□□□ -0.35
CHMP3-203ENST00000409225 A8MZ25 164 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 ATP6V0E1O15342 81 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 SULT1C4O75897 302 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 RBMY1DP0C7P1 496 aaKnown RBP12.85□□□□□ -0.35
CHMP3-203ENST00000409225 PITPNAQ00169 270 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 TMEM244Q5VVB8 128 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 LINC00311Q8N616 119 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 TMEM163Q8TC26 289 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 EME1Q96AY2 570 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 ZCCHC4Q9H5U6 513 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 MYRFQ9Y2G1 1151 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 PCLOQ9Y6V0 5065 aa12.85□□□□□ -0.35
CHMP3-203ENST00000409225 IGHV3-43A0A0B4J1X8 118 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 SDCBPO00560 298 aaPredicted RBP12.84□□□□□ -0.35
CHMP3-203ENST00000409225 OR2T7P0C7T2 308 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 IGHV3-43DP0DP04 118 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 ARSBP15848 533 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 MTNR1BP49286 362 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 FAM220AQ7Z4H9 259 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 GID4Q8IVV7 300 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 OR10AC1Q8NH08 325 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 CANT1Q8WVQ1 401 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 MBOAT4Q96T53 435 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 TOLLIPQ9H0E2 274 aa12.84□□□□□ -0.35
CHMP3-203ENST00000409225 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 FAM90A10PA6NDY2 464 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 HSPA12AO43301 675 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 SNX3O60493 162 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 MT-ND2P03891 347 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 DBTP11182 482 aaKnown RBP12.83□□□□□ -0.36
CHMP3-203ENST00000409225 GALEQ14376 348 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 MMDQ15546 238 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 ZSCAN26Q16670 478 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 OR13C3Q8NGS6 347 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-203ENST00000409225 CCDC124Q96CT7 223 aaKnown RBP12.83□□□□□ -0.36
CHMP3-203ENST00000409225 RSRP1Q9BUV0 290 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 RETNQ9HD89 108 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 KIAA1456Q9P272 454 aa12.83□□□□□ -0.36
CHMP3-203ENST00000409225 B2RBV5 119 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 SLC31A2O15432 143 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
CHMP3-203ENST00000409225 DAPP51397 102 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 EFNB1P98172 346 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 ARHGAP24Q8N264 748 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 OR51A4Q8NGJ6 313 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 CASTOR1Q8WTX7 329 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 DNAJC9Q8WXX5 260 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 ARL11Q969Q4 196 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
CHMP3-203ENST00000409225 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
CHMP3-203ENST00000409225 MRPS28Q9Y2Q9 187 aaKnown RBP12.82□□□□□ -0.36
CHMP3-203ENST00000409225 TXNL1O43396 289 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 GZMHP20718 246 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-203ENST00000409225 KCNJ3P48549 501 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 PAX5Q02548 391 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 KISS1Q15726 138 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 PIGYQ3MUY2 71 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 MINDY2Q8NBR6 621 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 OR52M1Q8NGK5 317 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 ASB9Q96DX5 294 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 DPCDQ9BVM2 203 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-203ENST00000409225 TPSG1Q9NRR2 321 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 FRRS1LQ9P0K9 344 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 ZNF581Q9P0T4 197 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 STUB1Q9UNE7 303 aa12.81□□□□□ -0.36
CHMP3-203ENST00000409225 IGHV7-81A0A0B4J1V7 117 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 C15orf65H3BRN8 121 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 MITFO75030 526 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-203ENST00000409225 FAM107AO95990 144 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 IGHV3-11P01762 117 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ISG15P05161 165 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 CNTFRP26992 372 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 EPHA2P29317 976 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ATP6V1E1P36543 226 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 NANOS3P60323 173 aaKnown RBP12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ZNF85Q03923 595 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ECSCRQ19T08 205 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ZNF691Q5VV52 312 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 LPCAT4Q643R3 524 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 C12orf73Q69YU5 71 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ELP2Q6IA86 826 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
CHMP3-203ENST00000409225 SUMF2Q8NBJ7 301 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms