RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GLYATL2Q8WU03 294 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 STARD4Q96DR4 205 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 RRNAD1Q96FB5 475 aaKnown RBP8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 CCDC120Q96HB5 630 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF488Q96MN9 340 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 PSMG3-AS1Q96PY0 264 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 SPIN2AQ99865 258 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 SPIN2BQ9BPZ2 258 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 NRIP2Q9BQI9 281 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 SLC5A7Q9GZV3 580 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 CXXC4Q9H2H0 198 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF71Q9NQZ8 489 aaPredicted RBP8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 TMEM100Q9NV29 134 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 GLS2Q9UI32 602 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 PURGQ9UJV8 347 aaKnown RBP8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 NUP50Q9UKX7 468 aa8.9□□□□□ -0.99
POLR2J3-201ENST00000379340 OR5H1A6NKK0 313 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 A8MXK9 166 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 NUDT19A8MXV4 375 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 E5RGE8 158 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 SH2D1BO14796 132 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 BET1O15155 118 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 PHF1O43189 567 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 RHBDL1O75783 438 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 CDS2O95674 445 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 SCTP09683 121 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 CECR9P0C854 216 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 GNRHRP30968 328 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 FOXF2Q12947 444 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF154Q13106 437 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 TSC22D1Q15714 1073 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF718Q3SXZ3 478 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 KRTCAP3Q53RY4 240 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 C1orf185Q5T7R7 199 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 MBNL2Q5VZF2 373 aaKnown RBP8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 CMTM1Q8IZ96 169 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 GAPTQ8N292 157 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF610Q8N9Z0 462 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 RDH5Q92781 318 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 IL22RA2Q969J5 263 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 ABHD14BQ96IU4 210 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 KIRREL1Q96J84 757 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 TMEM56Q96MV1 263 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 TMEM222Q9H0R3 208 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 CYTL1Q9NRR1 136 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 NSG2Q9Y328 171 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 TMEM56-RWDD3S4R434 201 aa8.89□□□□□ -0.99
POLR2J3-201ENST00000379340 K7EPK0 472 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 HS3ST1O14792 307 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 FGF16O43320 207 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 NXPH2O95156 264 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 GAPDHP04406 335 aaKnown RBP8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 HKR1P10072 659 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 RPL12P30050 165 aaKnown RBP8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 GCH1P30793 250 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 TIMP3P35625 211 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 ERVS71-1P61550 626 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 HERPUD1Q15011 391 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF497Q6ZNH5 498 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 H1FOOQ8IZA3 346 aaPredicted RBP8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 FAM71E2Q8N5Q1 922 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 RELL2Q8NC24 303 aaPredicted RBP8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 BVESQ8NE79 360 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 OR11L1Q8NGX0 322 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 OR10J5Q8NHC4 309 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 RNF141Q8WVD5 230 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 SECTM1Q8WVN6 248 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 TLNRD1Q9H1K6 362 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 HES4Q9HCC6 221 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 ZC4H2Q9NQZ6 224 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 UBE2J1Q9Y385 318 aaPredicted RBP8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 CENPEQ02224 2701 aa8.88□□□□□ -0.99
POLR2J3-201ENST00000379340 IGHV2OR16-5A0A0B4J2B6 119 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 A0A1B0GWJ7 208 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 MSGN1A6NI15 193 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 SLC33A1O00400 549 aaPredicted RBP8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 HSPB6O14558 160 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 TIMM8AO60220 97 aaPredicted RBP8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 WISP2O76076 250 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 AGFG2O95081 481 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF205O95201 554 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 OR2H2O95918 312 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 MPV17P39210 176 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 SP6Q3SY56 376 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 GPR157Q5UAW9 335 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 SEM1Q6ZVN7 128 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF695Q8IW36 515 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 LILRB1Q8NHL6 650 aaPredicted RBP8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 OPN3Q9H1Y3 402 aaPredicted RBP8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 BARX1Q9HBU1 254 aaPredicted RBP8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 OR2W1Q9Y3N9 320 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 WIPI2Q9Y4P8 454 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 LSM5Q9Y4Y9 91 aaKnown RBP8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 SLC25A15Q9Y619 301 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 DOPEY1Q5JWR5 2465 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 ESPL1Q14674 2120 aa8.87□□□□□ -0.99
POLR2J3-201ENST00000379340 IGHV1-18A0A0C4DH31 117 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 IGKV1-6A0A0C4DH72 117 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms