RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 FOXO1Q12778 655 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 ZNF266Q14584 549 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 OR8B8Q15620 311 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 ARHGAP21Q5T5U3 1957 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 PCNX1Q96RV3 2341 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 CDIPTO14735 213 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 NXPH2O95156 264 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 MEOX1P50221 254 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 UBE2KP61086 200 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 SPANXN5Q5MJ07 72 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 RIPPLY2Q5TAB7 128 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 ABLIM2Q6H8Q1 611 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 SELENOHQ8IZQ5 122 aaKnown RBP11.07□□□□□ -0.64
USP11-204ENST00000377107 CCDC54Q8NEL0 328 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 BOD1Q96IK1 185 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 ADGRG7Q96K78 797 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 FGF23Q9GZV9 251 aaPredicted RBP11.07□□□□□ -0.64
USP11-204ENST00000377107 SLC25A31Q9H0C2 315 aa11.07□□□□□ -0.64
USP11-204ENST00000377107 TNRC18O15417 2968 aaPredicted RBP11.07□□□□□ -0.64
USP11-204ENST00000377107 C9orf172C9J069 976 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 CA11O75493 328 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 TNFSF15O95150 251 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 IFNA5P01569 189 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 IGHV3-13P01766 116 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 IGHV3-7P01780 117 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 CD5P06127 495 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 SEC11BP0C7V7 166 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 TAGLN2P37802 199 aaKnown RBP11.06□□□□□ -0.64
USP11-204ENST00000377107 DCAF10Q5QP82 559 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 STX12Q86Y82 276 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 FAM58AQ8N1B3 248 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 TAAR9Q96RI9 348 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 USB1Q9BQ65 265 aaKnown RBP11.06□□□□□ -0.64
USP11-204ENST00000377107 RSG1Q9BU20 258 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 PLEKHF2Q9H8W4 249 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 Q9N2K0 584 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 KIR2DS1A0A191URI9 304 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 OR2C1O95371 312 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 KIR2DS4P43632 304 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 SULT1A1P50225 295 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 RPL23AP62750 156 aaKnown RBP11.06□□□□□ -0.64
USP11-204ENST00000377107 FABP9Q0Z7S8 132 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 KIR2DS1Q14954 304 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 HERPUD1Q15011 391 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 OR5T1Q8NG75 326 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 SCGB1C1Q8TD33 95 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 TMEM171Q8WVE6 324 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 SLC35B3Q9H1N7 401 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 CACNG5Q9UF02 275 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 COL5A1P20908 1838 aaPredicted RBP11.06□□□□□ -0.64
USP11-204ENST00000377107 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 DNPH1O43598 174 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 CELA3BP08861 270 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 PTAFRP25105 342 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 GFRA1P56159 465 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 FGF12P61328 243 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 NCMAPQ5T1S8 102 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 TPRX1Q8N7U7 411 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 HIST1H2BAQ96A08 127 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 REPIN1Q9BWE0 567 aaKnown RBP11.06□□□□□ -0.64
USP11-204ENST00000377107 C1QTNF5Q9BXJ0 243 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 ZNF703Q9H7S9 590 aaPredicted RBP11.06□□□□□ -0.64
USP11-204ENST00000377107 GLRX2Q9NS18 164 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 MED12LQ86YW9 2145 aa11.06□□□□□ -0.64
USP11-204ENST00000377107 A0A1W2PPE3 182 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 H0YL77 283 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 LHX2P50458 406 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 UBE2NP61088 152 aaKnown RBP11.05□□□□□ -0.64
USP11-204ENST00000377107 RAB11AP62491 216 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 SLC10A1Q14973 349 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 CLEC12BQ2HXU8 276 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 MDP1Q86V88 176 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 RFESDQ8TAC1 157 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 ZNF391Q9UJN7 358 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 BOD1L1Q8NFC6 3051 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 NCKAP5O14513 1909 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 SPTA1P02549 2419 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 COLCA2A8K830 154 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 ZNF674Q2M3X9 581 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 ZNF528Q3MIS6 628 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 OR2J1Q9GZK6 312 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 FAM234AQ9H0X4 552 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 CDH20Q9HBT6 801 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 LNP1A1A4G5 178 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 MT-CO3P00414 261 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 KRASP01116 189 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 PLA2G5P39877 138 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 FAM53AQ6NSI3 398 aaPredicted RBP11.05□□□□□ -0.64
USP11-204ENST00000377107 PLK3Q9H4B4 646 aa11.05□□□□□ -0.64
USP11-204ENST00000377107 NBASA2RRP1 2371 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms