RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CTAG1AP78358 180 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 C20orf204Q6ZNR8 217 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 OR8G5Q8NG78 346 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 ZNF488Q96MN9 340 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 IFT22Q9H7X7 185 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 FOXJ2Q9P0K8 574 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 CD300LBA8K4G0 201 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 C9orf172C9J069 976 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 WRBO00258 174 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 SLC34A2O95436 690 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 CBR1P16152 277 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 SPINK2P20155 84 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 PCSK4Q6UW60 755 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 IL22RA2Q969J5 263 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 APH1AQ96BI3 265 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 GNPNAT1Q96EK6 184 aaPredicted RBP21.6■■□□□ 1.05
C9orf40-201ENST00000376854 POM121L2Q96KW2 1035 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 RIMS4Q9H426 269 aaPredicted RBP21.6■■□□□ 1.05
C9orf40-201ENST00000376854 A0A1W2PNU3 283 aaPredicted RBP21.6■■□□□ 1.05
C9orf40-201ENST00000376854 A0A1W2PPE3 182 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 UBE2CO00762 179 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 HS3ST1O14792 307 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 EPHA1P21709 976 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 MPLP40238 635 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 ABHD17BQ5VST6 288 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 PLK3Q9H4B4 646 aa21.6■■□□□ 1.05
C9orf40-201ENST00000376854 ARR3P36575 388 aa21.59■■□□□ 1.05
C9orf40-201ENST00000376854 MAGEA5P43359 124 aa21.59■■□□□ 1.05
C9orf40-201ENST00000376854 OR5P3Q8WZ94 311 aa21.59■■□□□ 1.05
C9orf40-201ENST00000376854 BTBD17A6NE02 478 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 JMJD7P0C870 316 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 ZNF154Q13106 437 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 DBX2Q6ZNG2 339 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 LINC00596Q86U02 117 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 GTF3AQ92664 365 aaKnown RBP21.58■■□□□ 1.05
C9orf40-201ENST00000376854 RDH5Q92781 318 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 ZPBPQ9BS86 351 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 TAAR3PQ9P1P4 343 aa21.58■■□□□ 1.05
C9orf40-201ENST00000376854 F2RP25116 425 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 S100GP29377 79 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 RUNX1Q01196 453 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 PLP2Q04941 152 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 SPRY4Q9C004 299 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 KIAA1456Q9P272 454 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 RNF115Q9Y4L5 304 aa21.58■■□□□ 1.04
C9orf40-201ENST00000376854 FREM1Q5H8C1 2179 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 S100A12P80511 92 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 ADAM5Q6NVV9 412 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 TTTY12Q9BZ98 90 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 OR2W1Q9Y3N9 320 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 ANKRD30BLA7E2S9 258 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 LILRA1O75019 489 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 PAX9P55771 341 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 HAGHQ16775 308 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 HIKESHIQ53FT3 197 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 OR10J5Q8NHC4 309 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 OPA3Q9H6K4 179 aa21.57■■□□□ 1.04
C9orf40-201ENST00000376854 TRAV24A0A0B4J272 114 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 S100A8P05109 93 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 AKR1C8PQ5T2L2 129 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 ZNF324BQ6AW86 544 aaPredicted RBP21.56■■□□□ 1.04
C9orf40-201ENST00000376854 ZNF573Q86YE8 665 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 ATP5SQ99766 215 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 STRADBQ9C0K7 418 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 LIPGQ9Y5X9 500 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 TRBV6-6A0A0A6YYG2 114 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 A0A0G2JRQ6 117 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 RPS23P62266 143 aaKnown RBP21.56■■□□□ 1.04
C9orf40-201ENST00000376854 OR1C1Q15619 314 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 RBMS3Q6XE24 437 aaKnown RBP21.56■■□□□ 1.04
C9orf40-201ENST00000376854 C17orf78Q8N4C9 275 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 OR51H1Q8NH63 302 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 UNKLQ9H9P5 680 aaKnown RBP21.56■■□□□ 1.04
C9orf40-201ENST00000376854 BDP1A6H8Y1 2624 aa21.56■■□□□ 1.04
C9orf40-201ENST00000376854 LNP1A1A4G5 178 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 C3orf80F5H4A9 247 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 OR2B8PP59922 312 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 FABP9Q0Z7S8 132 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 IL24Q13007 206 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 FAM58AQ8N1B3 248 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 MALSU1Q96EH3 234 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 TNRC6AQ8NDV7 1962 aaKnown RBP21.55■■□□□ 1.04
C9orf40-201ENST00000376854 OR2C1O95371 312 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 SERPINE2P07093 398 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 CEACAM1P13688 526 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 B2MP61769 119 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 HLA-DRB3P79483 266 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 H1FOOQ8IZA3 346 aaPredicted RBP21.55■■□□□ 1.04
C9orf40-201ENST00000376854 OR51B6Q9H340 312 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 PLA2G3Q9NZ20 509 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 METTL1Q9UBP6 276 aaKnown RBP21.55■■□□□ 1.04
C9orf40-201ENST00000376854 ERRFI1Q9UJM3 462 aaPredicted RBP21.55■■□□□ 1.04
C9orf40-201ENST00000376854 MPC1Q9Y5U8 109 aa21.55■■□□□ 1.04
C9orf40-201ENST00000376854 CEBPGP53567 150 aa21.54■■□□□ 1.04
C9orf40-201ENST00000376854 GNG3P63215 75 aa21.54■■□□□ 1.04
C9orf40-201ENST00000376854 NUFIP2Q7Z417 695 aaKnown RBP21.54■■□□□ 1.04
C9orf40-201ENST00000376854 GPR146Q96CH1 333 aa21.54■■□□□ 1.04
C9orf40-201ENST00000376854 OR5B21A6NL26 309 aa21.54■■□□□ 1.04
C9orf40-201ENST00000376854 H3BQ15 152 aa21.54■■□□□ 1.04
C9orf40-201ENST00000376854 SRP19P09132 144 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms