RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C15orf65H3BRN8 121 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 MPZL2O60487 215 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 ELANEP08246 267 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 ECI1P42126 302 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 CFHR3Q02985 330 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 GALEQ14376 348 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 RSU1Q15404 277 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 C1orf146Q5VVC0 180 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 MEDAGQ5VYS4 303 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 FAM53AQ6NSI3 398 aaPredicted RBP10.79□□□□□ -0.68
CXCL12-202ENST00000374426 ASCL4Q6XD76 172 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 SYS1Q8N2H4 156 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 SUMF2Q8NBJ7 301 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 OR2T10Q8NGZ9 312 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 OR5AK2Q8NH90 309 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 ST6GALNAC6Q969X2 333 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 GPER1Q99527 375 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 GON7Q9BXV9 100 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 FAM118AQ9NWS6 357 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 AASSQ9UDR5 926 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 ZNF736B4DX44 427 aaPredicted RBP10.78□□□□□ -0.68
CXCL12-202ENST00000374426 C3orf84H3BNL1 204 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 IGHG4P01861 327 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 ALPLP05186 524 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 RAB3AP20336 220 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 GZMHP20718 246 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 FHL3Q13643 280 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 SATL1Q86VE3 508 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 LINC00311Q8N616 119 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 OR52M1Q8NGK5 317 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 UBALD1Q8TB05 177 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 C4orf3Q8WVX3 66 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 TSEN15Q8WW01 171 aaKnown RBP10.78□□□□□ -0.68
CXCL12-202ENST00000374426 RTN4IP1Q8WWV3 396 aaPredicted RBP10.78□□□□□ -0.68
CXCL12-202ENST00000374426 RBMXL1Q96E39 390 aaKnown RBP10.78□□□□□ -0.68
CXCL12-202ENST00000374426 CPNE2Q96FN4 548 aaPredicted RBP10.78□□□□□ -0.68
CXCL12-202ENST00000374426 MRPL48Q96GC5 212 aaKnown RBP10.78□□□□□ -0.68
CXCL12-202ENST00000374426 S1PR3Q99500 378 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 HSPB9Q9BQS6 159 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 FAM192AQ9GZU8 254 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 IFT22Q9H7X7 185 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 ST3GAL6Q9Y274 331 aa10.78□□□□□ -0.68
CXCL12-202ENST00000374426 SDCBPO00560 298 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 MAGEB3O15480 346 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 RRP9O43818 475 aaKnown RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 OR7C1O76099 320 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 CDRT1O95170 752 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 HTR3BO95264 441 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 MOSP00540 346 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 RPSAP08865 295 aaKnown RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 CD1BP29016 333 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 NHLRC3Q5JS37 347 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 RGP1Q92546 391 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 ARL11Q969Q4 196 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 ERVK13-1Q9NX77 482 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 GFOD1Q9NXC2 390 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 TAS2R4Q9NYW5 299 aa10.77□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF256Q9Y2P7 627 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 EPPK1P58107 5090 aaKnown RBP10.77□□□□□ -0.69
CXCL12-202ENST00000374426 IGHV3-43A0A0B4J1X8 118 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 TMEM30CPA0ZSE6 113 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 SNTNA6NMZ2 147 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 SLC31A2O15432 143 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 IGHV3-43DP0DP04 118 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 GABRB1P18505 474 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 PSMB8P28062 276 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 SOX2P48431 317 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 F2RL1P55085 397 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 RBM11P57052 281 aaKnown RBP10.76□□□□□ -0.69
CXCL12-202ENST00000374426 ZIK1Q3SY52 487 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF260Q3ZCT1 412 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 OR52N1Q8NH53 320 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 MYOZ3Q8TDC0 251 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 RASL11BQ9BPW5 248 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 JAM3Q9BX67 310 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 IL36GQ9NZH8 169 aa10.76□□□□□ -0.69
CXCL12-202ENST00000374426 SIRT4Q9Y6E7 314 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-202ENST00000374426 EI24O14681 340 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 GEMIN2O14893 280 aaKnown RBP10.75□□□□□ -0.69
CXCL12-202ENST00000374426 ORC5O43913 435 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 IGF1P05019 195 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 VDAC1P21796 283 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 IL3RAP26951 378 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 CHATP28329 748 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 SOX6P35712 828 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 VHLP40337 213 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 GTF2A1P52655 376 aaPredicted RBP10.75□□□□□ -0.69
CXCL12-202ENST00000374426 MRPL28Q13084 256 aaKnown RBP10.75□□□□□ -0.69
CXCL12-202ENST00000374426 OR11H1Q8NG94 326 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 CCDC107Q8WV48 283 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 KCTD7Q96MP8 289 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 MYCBPQ99417 103 aaPredicted RBP10.75□□□□□ -0.69
CXCL12-202ENST00000374426 AMBNQ9NP70 447 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF580Q9UK33 172 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 ORC6Q9Y5N6 252 aa10.75□□□□□ -0.69
CXCL12-202ENST00000374426 FADS2O95864 444 aaKnown RBP10.74□□□□□ -0.69
CXCL12-202ENST00000374426 MT-ND4P03905 459 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms