RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TUSC2O75896 110 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 M6PRP20645 277 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 ACSF3Q4G176 576 aaPredicted RBP13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 PRAMEF6Q5VXH4 476 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 Q6ZS49 121 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 SELENOHQ8IZQ5 122 aaKnown RBP13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 GLRX2Q9NS18 164 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 NSG2Q9Y328 171 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 LRP5LA4QPB2 252 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 ST8SIA3O43173 380 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 CECR9P0C854 216 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 EPHA1P21709 976 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 HLA-DRB3P79483 266 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 DMBX1Q8NFW5 382 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 DKK4Q9UBT3 224 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 TRAPPC2LQ9UL33 140 aa13.54□□□□□ -0.24
CNKSR1-202ENST00000374253 FAM24AA6NFZ4 105 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 A6NLC8 198 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 SSSCA1O60232 199 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 ADCYAP1P18509 176 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 CAV2P51636 162 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 IL13RA2Q14627 380 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 INO80CQ6PI98 192 aaPredicted RBP13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 ARL11Q969Q4 196 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 TREM1Q9NP99 234 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 PRR33A8MZF0 331 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 HSPA12AO43301 675 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 PGLYRP1O75594 196 aaPredicted RBP13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 FHITP49789 147 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 ZNF324BQ6AW86 544 aaPredicted RBP13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 HSD17B11Q8NBQ5 300 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 PRSS33Q8NF86 280 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 OR4D5Q8NGN0 318 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 SH3BGRL3Q9H299 93 aa13.53□□□□□ -0.24
CNKSR1-202ENST00000374253 PCNX1Q96RV3 2341 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 TAAR5O14804 337 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 C1QL1O75973 258 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 RAC2P15153 192 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 CLINT1Q14677 625 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 GUCA2BQ16661 112 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 FAM76BQ5HYJ3 339 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 SEM1Q6ZVN7 128 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 POM121Q96HA1 1249 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 NRIP2Q9BQI9 281 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 PPP1R3CQ9UQK1 317 aa13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 RBM7Q9Y580 266 aaKnown RBP13.52□□□□□ -0.24
CNKSR1-202ENST00000374253 ROS1P08922 2347 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 A0A1B0GV50 99 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 PSPNO60542 156 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 TNFSF13O75888 250 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 PGA5P0DJD9 388 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF16P17020 682 aaPredicted RBP13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 LINC00596Q86U02 117 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 CCDC36Q8IYA8 594 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 CMTM1Q8IZ96 169 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 PLEKHA2Q9HB19 425 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.25
CNKSR1-202ENST00000374253 KALRNO60229 2985 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 A0A0G2JRQ6 117 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM218A2RU14 115 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 FAM74A7A6NL05 159 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 IQCF6A8MYZ5 107 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 PRSS44E7EML9 344 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 TIMM8AO60220 97 aaPredicted RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 IGKV3-15P01624 115 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 PSG2P11465 335 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 CBR1P16152 277 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 ATF4P18848 351 aaPredicted RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 ERVK11-1P61568 191 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF169Q14929 603 aaPredicted RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 FAM74A3Q4VXF1 159 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 Q6ZRG5 221 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 ZADH2Q8N4Q0 377 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 TPRX1Q8N7U7 411 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 STARD4Q96DR4 205 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 KCNS2Q9ULS6 477 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 POLDIP2Q9Y2S7 368 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF891A8MT65 544 aaPredicted RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 CDK2AP1O14519 115 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 JTBO76095 146 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 COX5AP20674 150 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 Q6ZR03 302 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 FAM185AQ8N0U4 392 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 GTF3AQ92664 365 aaKnown RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM56Q96MV1 263 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 RIMS4Q9H426 269 aaPredicted RBP13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 POMT1Q9Y6A1 747 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM56-RWDD3S4R434 201 aa13.51□□□□□ -0.25
CNKSR1-202ENST00000374253 CHD3Q12873 2000 aaKnown RBP13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 TPD52L2O43399 206 aaKnown RBP13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 GPR137BO60478 399 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 CDS2O95674 445 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 CTXN2P0C2S0 81 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 OR8U9P0C7N5 309 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 GNMTQ14749 295 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 SRSF7Q16629 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms