RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
CHD4-201ENST00000357008 ERVH48-1M5A8F1 160 aa13□□□□□ -0.33
CHD4-201ENST00000357008 PUSL1Q8N0Z8 303 aaKnown RBP13□□□□□ -0.33
CHD4-201ENST00000357008 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
CHD4-201ENST00000357008 ADAMTS17Q8TE56 1095 aa13□□□□□ -0.33
CHD4-201ENST00000357008 PTPMT1Q8WUK0 201 aaPredicted RBP13□□□□□ -0.33
CHD4-201ENST00000357008 CDIPTO14735 213 aa13□□□□□ -0.33
CHD4-201ENST00000357008 FSTP19883 344 aa13□□□□□ -0.33
CHD4-201ENST00000357008 ZNF519Q8TB69 540 aa13□□□□□ -0.33
CHD4-201ENST00000357008 MELTFP08582 738 aa13□□□□□ -0.33
CHD4-201ENST00000357008 HIST1H1EP10412 219 aaKnown RBP13□□□□□ -0.33
CHD4-201ENST00000357008 ACP1P24666 158 aa13□□□□□ -0.33
CHD4-201ENST00000357008 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
CHD4-201ENST00000357008 DOLPP1Q86YN1 238 aa13□□□□□ -0.33
CHD4-201ENST00000357008 PNLIPP16233 465 aa13□□□□□ -0.33
CHD4-201ENST00000357008 SUCLG1P53597 346 aaKnown RBP13□□□□□ -0.33
CHD4-201ENST00000357008 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
CHD4-201ENST00000357008 PAFAH1B2P68402 229 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 SLC23A3Q6PIS1 610 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 PGLYRP3Q96LB9 341 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 TBX15Q96SF7 602 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 EPHA8P29322 1005 aaPredicted RBP12.99□□□□□ -0.33
CHD4-201ENST00000357008 TEPPQ6URK8 271 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 NAGKQ9UJ70 344 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 MFSD2BA6NFX1 497 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
CHD4-201ENST00000357008 PSG2P11465 335 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 CYB561D1Q8N8Q1 229 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 TRAV38-1A0A0B4J264 116 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 MMP9P14780 707 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 COX7A1P24310 79 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 RPL30P62888 115 aaKnown RBP12.99□□□□□ -0.33
CHD4-201ENST00000357008 BPIFA4PQ86YQ2 179 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 WDFY1Q8IWB7 410 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 PRSS27Q9BQR3 290 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
CHD4-201ENST00000357008 ZPLD1Q8TCW7 415 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 ELOVL1Q9BW60 279 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 KCNK7Q9Y2U2 307 aa12.99□□□□□ -0.33
CHD4-201ENST00000357008 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 DIRC3C9JPN6 131 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 COL5A1-AS1Q5SY13 56 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 ZDHHC16Q969W1 377 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 TMEM38BQ9NVV0 291 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 PCOLCE2Q9UKZ9 415 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 UFC1Q9Y3C8 167 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 MT-CO3P00414 261 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 NPY1RP25929 384 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 CD200R1LQ6Q8B3 271 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 SCGB1D4Q6XE38 83 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 OR2Y1Q8NGV0 311 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 PCM1Q15154 2024 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 PSMB2P49721 201 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 HERVK_113P61574 105 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 C10orf113Q5VZT2 155 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 ORM1P02763 201 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 LRRC75AQ8NAA5 344 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 OR2D3Q8NGH3 330 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 LRRC3BQ96PB8 259 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 ATG101Q9BSB4 218 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 OR5AC2Q9NZP5 309 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 TUSC5Q8IXB3 177 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 TMEM204Q9BSN7 226 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 CDK5RAP2Q96SN8 1893 aa12.98□□□□□ -0.33
CHD4-201ENST00000357008 C5orf52A6NGY3 159 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 DNPH1O43598 174 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 BRS3P32247 399 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 LIMS1P48059 325 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 IFITM2Q01629 132 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 SRSF5Q13243 272 aaKnown RBP12.97□□□□□ -0.33
CHD4-201ENST00000357008 OR4X1Q8NH49 305 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 CA5BP1Q8WTZ4 195 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 CLEC5AQ9NY25 188 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 TRBV5-5A0A0J9YX44 114 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 ZFP36L2P47974 494 aaKnown RBP12.97□□□□□ -0.33
CHD4-201ENST00000357008 GAB4Q2WGN9 574 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 FCGR3AP08637 254 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 OR4A8P0C604 315 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 WDR74Q6RFH5 385 aaPredicted RBP12.97□□□□□ -0.33
CHD4-201ENST00000357008 OR2V2Q96R30 315 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 HDHD3Q9BSH5 251 aaPredicted RBP12.97□□□□□ -0.33
CHD4-201ENST00000357008 SRP14P37108 136 aaKnown RBP12.97□□□□□ -0.33
CHD4-201ENST00000357008 GPX7Q96SL4 187 aaPredicted RBP12.97□□□□□ -0.33
CHD4-201ENST00000357008 CENPVL1A0A0U1RR11 272 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 IFITM10A6NMD0 228 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 KCNAB3O43448 404 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 OR1K1Q8NGR3 316 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 WNT16Q9UBV4 365 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 TINAGQ9UJW2 476 aa12.97□□□□□ -0.33
CHD4-201ENST00000357008 PPIHO43447 177 aaKnown RBP12.96□□□□□ -0.33
CHD4-201ENST00000357008 HSPB1P04792 205 aaKnown RBP12.96□□□□□ -0.33
CHD4-201ENST00000357008 RBM11P57052 281 aaKnown RBP12.96□□□□□ -0.33
CHD4-201ENST00000357008 ZP4Q12836 540 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms