RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 SCGNO76038 276 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 HLA-AP01891 365 aaKnown RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF735P0CB33 412 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 SMIM6P0DI80 62 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 TBPP20226 339 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 ZBTB25P24278 435 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 APOBEC3AP31941 199 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 PMELP40967 661 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 SELENOVP59797 346 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 EIF5AP63241 154 aaKnown RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 TAF9Q16594 264 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 MKXQ8IYA7 352 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 OSR2Q8N2R0 312 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 NUDT16L1Q9BRJ7 211 aaKnown RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
CXCL12-201ENST00000343575 CHRM2P08172 466 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 ADH4P08319 380 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 RBM11P57052 281 aaKnown RBP12.39□□□□□ -0.43
CXCL12-201ENST00000343575 TAS2R31P59538 309 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 FGF12P61328 243 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 PDCD1Q15116 288 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 EFNB3Q15768 340 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 WDR82Q6UXN9 313 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 OR5AP2Q8NGF4 316 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 FAM222BQ8WU58 562 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
CXCL12-201ENST00000343575 MEGF10Q96KG7 1140 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 TCEAL7Q9BRU2 100 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 URM1Q9BTM9 101 aaKnown RBP12.39□□□□□ -0.43
CXCL12-201ENST00000343575 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 ST3GAL6Q9Y274 331 aa12.39□□□□□ -0.43
CXCL12-201ENST00000343575 TMEM235A6NFC5 223 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 ACAA1P09110 424 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-201ENST00000343575 PGA5P0DJD9 388 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 GNB3P16520 340 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 RAB5BP61020 215 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 SWI5Q1ZZU3 235 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 CDNFQ49AH0 187 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 SFT2D1Q8WV19 159 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 ITLN1Q8WWA0 313 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 ARHGAP5-AS1Q96IT6 56 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 MFNGO00587 321 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 S100A9P06702 114 aaKnown RBP12.38□□□□□ -0.43
CXCL12-201ENST00000343575 CPT2P23786 658 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 GABRR1P24046 479 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 PSMB6P28072 239 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 BLVRBP30043 206 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-201ENST00000343575 PJVKQ0ZLH3 352 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 RNASE10Q5GAN6 216 aaKnown RBP12.38□□□□□ -0.43
CXCL12-201ENST00000343575 EIF5AL1Q6IS14 154 aaKnown RBP12.38□□□□□ -0.43
CXCL12-201ENST00000343575 OR56B1Q8NGI3 324 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 NMES1Q9C002 83 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 ZNF230Q9UIE0 474 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-201ENST00000343575 ZDHHC8Q9ULC8 765 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
CXCL12-201ENST00000343575 WNT9BO14905 357 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
CXCL12-201ENST00000343575 HIST1H1DP16402 221 aaKnown RBP12.37□□□□□ -0.43
CXCL12-201ENST00000343575 GATA4P43694 442 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 C6orf201Q7Z4U5 140 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 OR13C8Q8NGS7 320 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 PECRQ9BY49 303 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-201ENST00000343575 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 POLDIP2Q9Y2S7 368 aa12.37□□□□□ -0.43
CXCL12-201ENST00000343575 C9orf170A2RU37 121 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 SSX5O60225 188 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CD55P08174 381 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 ADCYAP1P18509 176 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CHATP28329 748 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 DUSP1P28562 367 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CFHR2P36980 270 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 ARHGDIBP52566 201 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 TMEM88Q6PEY1 159 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 POC1AQ8NBT0 407 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.36□□□□□ -0.43
CXCL12-201ENST00000343575 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 C1orf123Q9NWV4 160 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 CLEC18AA5D8T8 446 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 A6NLC8 198 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 VSTM5A8MXK1 200 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 B9A039 149 aa12.36□□□□□ -0.43
CXCL12-201ENST00000343575 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-201ENST00000343575 M0QYG6 137 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms