RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SLC5A7Q9GZV3 580 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 CXXC4Q9H2H0 198 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 ZC4H2Q9NQZ6 224 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 ASF1BQ9NVP2 202 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 SH3BGRL2Q9UJC5 107 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 TUBD1Q9UJT1 453 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 ATP23Q9Y6H3 246 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 A6NLC8 198 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 FAM87AP0C7U9 286 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 SMCO1Q147U7 214 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 HERPUD1Q15011 391 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 GFRALQ6UXV0 394 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 ZNF826PQ6ZT77 177 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 PCDHB10Q9UN67 800 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 PRR14LQ5THK1 2151 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 ESPL1Q14674 2120 aa15.75■□□□□ 0.11
HOXA9-201ENST00000343483 FGF16O43320 207 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 DIRAS3O95661 229 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 GLAP06280 429 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 UCP3P55916 312 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 OR1S2Q8NGQ3 325 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 OR11L1Q8NGX0 322 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 TMED6Q8WW62 240 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 SYT3Q9BQG1 590 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 SUCNR1Q9BXA5 334 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 OR2S2Q9NQN1 319 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 RP1L1Q8IWN7 2480 aaPredicted RBP15.74■□□□□ 0.11
HOXA9-201ENST00000343483 HKR1P10072 659 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 RCC1P18754 421 aaPredicted RBP15.74■□□□□ 0.11
HOXA9-201ENST00000343483 FAM27E3Q08E93 113 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 PRAMEF6Q5VXH4 476 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 C1orf174Q8IYL3 243 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 BOLLQ8N9W6 283 aaKnown RBP15.74■□□□□ 0.11
HOXA9-201ENST00000343483 SPERTQ8NA61 448 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 MS4A7Q9GZW8 240 aaPredicted RBP15.74■□□□□ 0.11
HOXA9-201ENST00000343483 PIGMQ9H3S5 423 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 UFSP2Q9NUQ7 469 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 DUSP13Q9UII6 198 aa15.74■□□□□ 0.11
HOXA9-201ENST00000343483 LSM5Q9Y4Y9 91 aaKnown RBP15.74■□□□□ 0.11
HOXA9-201ENST00000343483 A8MXE2 369 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 SLC33A1O00400 549 aaPredicted RBP15.73■□□□□ 0.11
HOXA9-201ENST00000343483 SH2D1BO14796 132 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 DEDDO75618 318 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 SCGB1D2O95969 90 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 CRYAAP02489 173 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 UCNP55089 124 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 PRR30Q53SZ7 412 aaPredicted RBP15.73■□□□□ 0.11
HOXA9-201ENST00000343483 LIAT1Q6ZQX7 453 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 CCDC71LQ8N9Z2 235 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 RNF141Q8WVD5 230 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 MARC2Q969Z3 335 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 RSRP1Q9BUV0 290 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 OR14J1Q9UGF5 321 aa15.73■□□□□ 0.11
HOXA9-201ENST00000343483 IGKV1-6A0A0C4DH72 117 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 HOXA4Q00056 320 aaPredicted RBP15.72■□□□□ 0.11
HOXA9-201ENST00000343483 ZNF146Q15072 292 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 SPIN3Q5JUX0 258 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 FIP1L1Q6UN15 594 aaKnown RBP15.72■□□□□ 0.11
HOXA9-201ENST00000343483 SNRNP40Q96DI7 357 aaKnown RBP15.72■□□□□ 0.11
HOXA9-201ENST00000343483 TRBV6-6A0A0A6YYG2 114 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 A0A0G2JNJ9 132 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 K7EPK0 472 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 TAAR5O14804 337 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 WNT9BO14905 357 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 RPL12P30050 165 aaKnown RBP15.72■□□□□ 0.11
HOXA9-201ENST00000343483 CEBPDP49716 269 aaPredicted RBP15.72■□□□□ 0.11
HOXA9-201ENST00000343483 LYZL2Q7Z4W2 148 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 C11orf53Q8IXP5 236 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 FAM71E2Q8N5Q1 922 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 LRTM2Q8N967 370 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 BPIFCQ8NFQ6 507 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 SECTM1Q8WVN6 248 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 Q9UFV3 132 aa15.72■□□□□ 0.11
HOXA9-201ENST00000343483 TRAV39A0A0B4J263 110 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 PHF1O43189 567 aaPredicted RBP15.71■□□□□ 0.11
HOXA9-201ENST00000343483 APOC3P02656 99 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 CTXN2P0C2S0 81 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 MDH2P40926 338 aaKnown RBP15.71■□□□□ 0.11
HOXA9-201ENST00000343483 BTN1A1Q13410 526 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 MSMPQ1L6U9 139 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 VHLLQ6RSH7 139 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 PCSK4Q6UW60 755 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 LRP11Q86VZ4 500 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 LGI3Q8N145 548 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 ZNF565Q8N9K5 539 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 OR2Z1Q8NG97 314 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 PLPPR1Q8TBJ4 325 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 C18orf12Q96KH6 178 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 GLS2Q9UI32 602 aa15.71■□□□□ 0.11
HOXA9-201ENST00000343483 HAND1O96004 215 aa15.71■□□□□ 0.1
HOXA9-201ENST00000343483 EIF5AP63241 154 aaKnown RBP15.71■□□□□ 0.1
HOXA9-201ENST00000343483 HLA-DRB3P79483 266 aa15.71■□□□□ 0.1
HOXA9-201ENST00000343483 RPL7L1Q6DKI1 246 aaKnown RBP15.71■□□□□ 0.1
HOXA9-201ENST00000343483 GLYATL2Q8WU03 294 aa15.71■□□□□ 0.1
HOXA9-201ENST00000343483 IL1F10Q8WWZ1 152 aa15.71■□□□□ 0.1
HOXA9-201ENST00000343483 MSI2Q96DH6 328 aaKnown RBP15.71■□□□□ 0.1
HOXA9-201ENST00000343483 NARS2Q96I59 477 aaKnown RBP15.71■□□□□ 0.1
HOXA9-201ENST00000343483 HES4Q9HCC6 221 aa15.71■□□□□ 0.1
HOXA9-201ENST00000343483 H7C1Q1 480 aa15.7■□□□□ 0.1
HOXA9-201ENST00000343483 ACAA1P09110 424 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms