RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SEBOXQ9HB31 216 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 DHRS7CA6NNS2 312 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 IFITM2Q01629 132 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 SLC25A40Q8TBP6 338 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 BCL2L2Q92843 193 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 LHFPL6Q9Y693 200 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 BHLHA15Q7RTS1 189 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 MYPOPQ86VE0 399 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR2T10Q8NGZ9 312 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 AQP3Q92482 292 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 TMEM167BQ9NRX6 74 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 ATP6V0CP27449 155 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 TMEM50BP56557 158 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 ADAMTS17Q8TE56 1095 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 APOBEC4Q8WW27 367 aaKnown RBP14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 RNF2Q99496 336 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 AAMDCQ9H7C9 122 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 SIRT7Q9NRC8 400 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 THY1P04216 161 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 FGF12P61328 243 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 CEACAM21Q3KPI0 293 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR1L4Q8NGR5 311 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 SDHCQ99643 169 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 NUDT16L1Q9BRJ7 211 aaKnown RBP14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM206AQ9NX38 181 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 GNB2P62879 340 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 GABRA6Q16445 453 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 ISOC2Q96AB3 205 aa14.88□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A10PA6NDY2 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A18PA6NE21 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A16PA6NEW6 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A20PA6NIJ5 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A8PA6NJQ4 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A7PA6NKC0 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A22PA8MWA6 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A12PA8MX19 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A5PA8MXJ8 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A23PA8MXZ1 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 M0R296 226 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 CTSBP07858 339 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A15PP0C7V4 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A13PP0C7W8 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A14PP0C7W9 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM90A24PP0C7X0 464 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 MEOX2P50222 304 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 PRRX1P54821 245 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 SPINK9Q5DT21 86 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 RCC2Q9P258 522 aaKnown RBP14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 PRSS50Q9UI38 385 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 IGHV1-45A0A0A0MS14 117 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 SULT1A2P50226 295 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 OVCH2Q7RTZ1 564 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 SLC24A4Q8NFF2 622 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 NPIPB9F8W1W9 429 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR5I1Q13606 314 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 FAM74A3Q4VXF1 159 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 BTNL3Q6UXE8 466 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 C1orf174Q8IYL3 243 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 DYRK2Q92630 601 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 TTTY12Q9BZ98 90 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 SERTM2A0A1B0GWG4 89 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 HIST1H3AP68431 136 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 MDP1Q86V88 176 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 WDR61Q9GZS3 305 aaKnown RBP14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 MS4A7Q9GZW8 240 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 HS3ST3B1Q9Y662 390 aa14.87□□□□□ -0.03
TRAPPC11-201ENST00000334690 ERVH48-1M5A8F1 160 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 MMP7P09237 267 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 SPINK2P20155 84 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 EGR4Q05215 589 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 FOXC1Q12948 553 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 SLC35E3Q7Z769 313 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 NRIP2Q9BQI9 281 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 HSF4Q9ULV5 492 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 A0A1W2PR77 199 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 SHISA3A0PJX4 238 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 MMP9P14780 707 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 KHDC3LQ587J8 217 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 FNDC7Q5VTL7 733 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR4F17Q8NGA8 305 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 SDK2Q58EX2 2172 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 IGHV3-13P01766 116 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 IGHV3-7P01780 117 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 COX19Q49B96 90 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 ACSM6Q6P461 480 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 MISP3Q96FF7 219 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 TECRQ9NZ01 308 aaKnown RBP14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 RNF7Q9UBF6 113 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 ZNF318Q5VUA4 2279 aa14.86□□□□□ -0.03
TRAPPC11-201ENST00000334690 C11orf94C9JXX5 98 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 SERF2P84101 59 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR2J1Q9GZK6 312 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 SCN2AQ99250 2005 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 RALGAPA2Q2PPJ7 1873 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 FCN1O00602 326 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR2A4O95047 310 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 CELA2AP08217 269 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 DAOP14920 347 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 CEACAM3P40198 252 aa14.85□□□□□ -0.03
TRAPPC11-201ENST00000334690 OR11H4Q8NGC9 324 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms