RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CISD1Q9NZ45 108 aaKnown RBP16.35■□□□□ 0.21
RTN4-201ENST00000317610 A0A0G2JMM0 328 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 A0A1W2PPB8 328 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 A0A1W2PRS3 328 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 KIR3DP1A8MWS1 328 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 CYB5BO43169 146 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 HIST3H2BBQ8N257 126 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 OR2V1Q8NHB1 315 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 SGCZQ96LD1 299 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 REPIN1Q9BWE0 567 aaKnown RBP16.34■□□□□ 0.21
RTN4-201ENST00000317610 A0A1B0GU03 582 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 F2RP25116 425 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 CD200P41217 278 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 PNRC1Q12796 327 aaPredicted RBP16.34■□□□□ 0.21
RTN4-201ENST00000317610 PCSK4Q6UW60 755 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 ZNF383Q8NA42 475 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 OR56B2PQ8NGI1 322 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 OR10D3Q8NH80 312 aa16.34■□□□□ 0.21
RTN4-201ENST00000317610 GTF3AQ92664 365 aaKnown RBP16.34■□□□□ 0.21
RTN4-201ENST00000317610 TNRC6AQ8NDV7 1962 aaKnown RBP16.33■□□□□ 0.2
RTN4-201ENST00000317610 PIGBOS1A0A0B4J2F0 54 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 A0A0G2JRQ6 117 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 TGOLN2O43493 480 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 NXPH3O95157 252 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 TRGC2P03986 189 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.2
RTN4-201ENST00000317610 WNT2P09544 360 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 PRDX4Q13162 271 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 CDPF1Q6NVV7 123 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 THNSL2Q86YJ6 484 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 GPR146Q96CH1 333 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 RAB40CQ96S21 281 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 SDK2Q58EX2 2172 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 IFNA5P01569 189 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 SOD3P08294 240 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 ACSF3Q4G176 576 aaPredicted RBP16.33■□□□□ 0.2
RTN4-201ENST00000317610 P4HA3Q7Z4N8 544 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 MBD3L1Q8WWY6 194 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 PFDN5Q99471 154 aa16.33■□□□□ 0.2
RTN4-201ENST00000317610 TRBV6-6A0A0A6YYG2 114 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 PPP1R2P9O14990 202 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 CYTIPO60759 359 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 BCL2P10415 239 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 HAAOP46952 286 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 RPS18P62269 152 aaKnown RBP16.32■□□□□ 0.2
RTN4-201ENST00000317610 NKX6-1P78426 367 aaPredicted RBP16.32■□□□□ 0.2
RTN4-201ENST00000317610 C9orf152Q5JTZ5 239 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 OR10D4PQ8NGN7 298 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 OR2Y1Q8NGV0 311 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 RIMS4Q9H426 269 aaPredicted RBP16.32■□□□□ 0.2
RTN4-201ENST00000317610 PRDM13Q9H4Q3 707 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 MTCH1Q9NZJ7 389 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 CRIM1Q9NZV1 1036 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 GNG13Q9P2W3 67 aa16.32■□□□□ 0.2
RTN4-201ENST00000317610 K7ESF4 209 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 SLC33A1O00400 549 aaPredicted RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 ATXN7O15265 892 aaPredicted RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 HIST1H1BP16401 226 aaKnown RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 CEACAM21Q3KPI0 293 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 ZNF600Q6ZNG1 722 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 C1orf87Q8N0U7 546 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 TMEM45BQ96B21 275 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 FAM210BQ96KR6 192 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 RYDENQ9NUL5 291 aaKnown RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 IL36RNQ9UBH0 155 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 WNT16Q9UBV4 365 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 C9J4A7 227 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 PHOX2AO14813 284 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 CYB5R3P00387 301 aaPredicted RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 RD3LP0DJH9 198 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 ZNF324BQ6AW86 544 aaPredicted RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 MRPL30Q8TCC3 161 aaKnown RBP16.31■□□□□ 0.2
RTN4-201ENST00000317610 ABHD5Q8WTS1 349 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 RPRMQ9NS64 109 aa16.31■□□□□ 0.2
RTN4-201ENST00000317610 LRRC3CA6NJW4 275 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 TNFSF12O43508 249 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 PTBP3O95758 552 aaKnown RBP16.3■□□□□ 0.2
RTN4-201ENST00000317610 P04436 131 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 GPM6AP51674 278 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 CD81P60033 236 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 RAB11AP62491 216 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 ZFP36L1Q07352 338 aaKnown RBP16.3■□□□□ 0.2
RTN4-201ENST00000317610 GFI1BQ5VTD9 330 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 PSMG3Q9BT73 122 aaPredicted RBP16.3■□□□□ 0.2
RTN4-201ENST00000317610 GPR61Q9BZJ8 451 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 CLDN34H7C241 214 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 RFPL3SP0C7P2 107 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 TRGC1P0CF51 173 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 S100GP29377 79 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 ZNF787Q6DD87 383 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 ZNF880Q6PDB4 577 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 LINC00596Q86U02 117 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 MKXQ8IYA7 352 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 ZDHHC23Q8IYP9 409 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 CA5BP1Q8WTZ4 195 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 FRZBQ92765 325 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 P2RX4Q99571 388 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 RNF150Q9ULK6 438 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms