RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 UBALD1Q8TB05 177 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 DPF1Q92782 380 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 RBMXL1Q96E39 390 aaKnown RBP13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 EAF1Q96JC9 268 aaPredicted RBP13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 Q96MT0 163 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 SLC29A1Q99808 456 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 S100A14Q9HCY8 104 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 MRPS18AQ9NVS2 196 aaKnown RBP13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 ING4Q9UNL4 249 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 ST3GAL6Q9Y274 331 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 C15orf65H3BRN8 121 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 CCRL2O00421 344 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 GEMIN2O14893 280 aaKnown RBP13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 GAPDHP04406 335 aaKnown RBP13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 GZMHP20718 246 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 RCN1Q15293 331 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 ZNF695Q8IW36 515 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 Q8N6K4 173 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 APH1BQ8WW43 257 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 CPNE2Q96FN4 548 aaPredicted RBP13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 RAX2Q96IS3 184 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 MCRIP2Q9BUT9 160 aaKnown RBP13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 PLSCR3Q9NRY6 295 aa13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 SIRT4Q9Y6E7 314 aaPredicted RBP13.73□□□□□ -0.21
EXOSC4-201ENST00000316052 NCBP2LA6PVI3 153 aaKnown RBP13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 MPZL2O60487 215 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 OR7C1O76099 320 aaPredicted RBP13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 SLC6A1P30531 599 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 RBM11P57052 281 aaKnown RBP13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 SLC35B1P78383 322 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 NHLRC3Q5JS37 347 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 LCNL1Q6ZST4 164 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 TGIF2LXQ8IUE1 241 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 FOXRED2Q8IWF2 684 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 COMMD1Q8N668 190 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 GPR148Q8TDV2 347 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 CCDC107Q8WV48 283 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 ARL11Q969Q4 196 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 ORAI1Q96D31 301 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 FAM118AQ9NWS6 357 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 IL36GQ9NZH8 169 aa13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 NKX1-2Q9UD57 310 aaPredicted RBP13.72□□□□□ -0.21
EXOSC4-201ENST00000316052 LOC100130705A0A1B0GUX0 176 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 A0A1W2PP11 408 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 TMEM30CPA0ZSE6 113 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 ZNF736B4DX44 427 aaPredicted RBP13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 CCL24O00175 119 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 RPLP1P05386 114 aaKnown RBP13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 GPR12P47775 334 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 TEX38Q6PEX7 206 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 IZUMO1Q8IYV9 350 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 LINC00311Q8N616 119 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 Q8N9W7 124 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 TMEM104Q8NE00 496 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 OR52M1Q8NGK5 317 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 ST6GALNAC6Q969X2 333 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 TMEM106AQ96A25 262 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 METTL9Q9H1A3 318 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 ABCG5Q9H222 651 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 TMEM138Q9NPI0 162 aa13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.21
EXOSC4-201ENST00000316052 HUWE1Q7Z6Z7 4374 aaKnown RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 SORL1Q92673 2214 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 IGHV3-43A0A0B4J1X8 118 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 SDCBPO00560 298 aaPredicted RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 MT-ND4P03905 459 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 CD2P06729 351 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 IGHV3-43DP0DP04 118 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF93P35789 620 aaPredicted RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 ETV1P50549 477 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 SMN1Q16637 294 aaKnown RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 PNLIPRP3Q17RR3 467 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 KLHL22Q53GT1 634 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 RPL22L1Q6P5R6 122 aaKnown RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 UNQ9370/PRO34162Q6UXP9 181 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 OR2T10Q8NGZ9 312 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
EXOSC4-201ENST00000316052 AP4M1O00189 453 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 SLC31A2O15432 143 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 WBP4O75554 376 aaKnown RBP13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 CSTBP04080 98 aaKnown RBP13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 SERPINA2P20848 420 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 RAB25P57735 213 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 DGCR2P98153 550 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 CCDC58Q4VC31 144 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 ATAD3CQ5T2N8 411 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 DDI2Q5TDH0 399 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 ZNF497Q6ZNH5 498 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 C8orf31Q8N9H6 132 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 OR13C5Q8NGS8 318 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 WWC2-AS2Q96NR7 200 aa13.69□□□□□ -0.22
EXOSC4-201ENST00000316052 LIN7CQ9NUP9 197 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms