RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SFTA3P0C7M3 94 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 SMIM18P0DKX4 95 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 STARD6P59095 220 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 DLK1P80370 383 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 LRRC75AQ8NAA5 344 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 ALKBH7Q9BT30 221 aaPredicted RBP10.68□□□□□ -0.7
PCF11-201ENST00000298281 IL20Q9NYY1 176 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 C5P01031 1676 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 MYF5P13349 255 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 EMDP50402 254 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 OR4S2Q8NH73 311 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 CEP250Q9BV73 2442 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 HMX2A2RU54 273 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 CCL2P13500 99 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 ZNF25P17030 456 aaPredicted RBP10.68□□□□□ -0.7
PCF11-201ENST00000298281 NPBWR2P48146 333 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 CD81P60033 236 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 C10orf113Q5VZT2 155 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 KLK15Q9H2R5 256 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 DYSFO75923 2080 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 FOXO1Q12778 655 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 KHDC3LQ587J8 217 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 OR2A5Q96R48 311 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 A0A1W2PS18 150 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 MC5RP33032 325 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 MED19A0JLT2 244 aaPredicted RBP10.68□□□□□ -0.7
PCF11-201ENST00000298281 H3BMH7 237 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 GZMKP49863 264 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 RAG2P55895 527 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 OR10G4Q8NGN3 311 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 OR10G9Q8NGN4 311 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 OR10G7Q8NGN6 311 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 CNRIP1Q96F85 164 aaPredicted RBP10.68□□□□□ -0.7
PCF11-201ENST00000298281 LRP12Q9Y561 859 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 HILPDAQ9Y5L2 63 aa10.68□□□□□ -0.7
PCF11-201ENST00000298281 ZNF253O75346 499 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 WIPI1Q5MNZ9 446 aaPredicted RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 C11orf87Q6NUJ2 197 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 ZNF793Q6ZN11 406 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 RIMKLAQ8IXN7 391 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 LHFPL5Q8TAF8 219 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 VSTM2AQ8TAG5 236 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 ALG1L2C9J202 215 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 CKS2P33552 79 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 WNT5BQ9H1J7 359 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 FCGR2BP31994 310 aaPredicted RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 SLC37A1P57057 533 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 ARF6P62330 175 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 ZNF418Q8TF45 676 aaPredicted RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 WDR89Q96FK6 387 aaPredicted RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 PRRX2Q99811 253 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 HEXA-AS1Q9H8Q6 139 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 INHBBP09529 407 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 DCTDP32321 178 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 TMEM196Q5HYL7 178 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 MRGPREQ86SM8 312 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 C20orf196Q8IYI0 205 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 OR5C1Q8NGR4 320 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 CCL4L1Q8NHW4 92 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 ZNF707Q96C28 371 aaPredicted RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 RASL12Q9NYN1 266 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 TBX21Q9UL17 535 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 FFAR1O14842 300 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 PRKNO60260 465 aaPredicted RBP10.67□□□□□ -0.7
PCF11-201ENST00000298281 BSXQ3C1V8 233 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 SAPCD1Q5SSQ6 148 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 STXBP6Q8NFX7 210 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 YIPF6Q96EC8 236 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 JKAMPQ9P055 326 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 NKX2-2O95096 273 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 B4GALNT1Q00973 533 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 SSPNQ14714 243 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 LRRC75BQ2VPJ9 315 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 MAP6Q96JE9 813 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 SPNS1Q9H2V7 528 aa10.67□□□□□ -0.7
PCF11-201ENST00000298281 SLC25A17O43808 307 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 DYNLT3P51808 116 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 SELENOTP62341 195 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 SPOCK3Q9BQ16 436 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 CACNG5Q9UF02 275 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 FLVCR2Q9UPI3 526 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 DOK1Q99704 481 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 DUXBA0A1W2PPF3 345 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 CLDN34H7C241 214 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 C10orf128Q5T292 105 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 FAM169BQ8N8A8 192 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 MANBALQ9NQG1 85 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 WNT16Q9UBV4 365 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 EPPINO95925 133 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 HAND1O96004 215 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 MRPL54Q6P161 138 aaKnown RBP10.66□□□□□ -0.7
PCF11-201ENST00000298281 SLC25A40Q8TBP6 338 aa10.66□□□□□ -0.7
PCF11-201ENST00000298281 VN1R17PQ8TDU5 208 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms