RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 RPS24P62847 133 aaKnown RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 FUT7Q11130 342 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF770Q6IQ21 691 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 VKORC1L1Q8N0U8 176 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 NEIL2Q969S2 332 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 KIR2DL4Q99706 377 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 NPDC1Q9NQX5 325 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1W2PRS3 328 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 HCRTR1O43613 425 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 DDNO94850 711 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 HSD52Q0P140 79 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 OR4D9Q8NGE8 314 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 OR52N5Q8NH56 324 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 APOBEC3DQ96AK3 386 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 GPR35Q9HC97 309 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 PLSCR4Q9NRQ2 329 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 PTGESO14684 152 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 HPXP02790 462 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM176BQ3YBM2 270 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SDHAF4Q5VUM1 108 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 RNF166Q96A37 237 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 IL17CQ9P0M4 197 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 AMMECR1Q9Y4X0 333 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 COL22A1Q8NFW1 1626 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 A0A0G2JLW4 131 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 FCMRO60667 390 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 UMODP07911 640 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 YPEL5P62699 121 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 PRR18Q8N4B5 295 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TIMD4Q96H15 378 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SDHCQ99643 169 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 PRSS37A4D1T9 235 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 PSMB11A5LHX3 300 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 CCL22O00626 93 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 C1SP09871 688 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 HOXA5P20719 270 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 CCSMST1Q4G0I0 132 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR10V1Q8NGI7 309 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 SOSTQ9BQB4 213 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 YAE1D1Q9NRH1 226 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 TRGV10A0A0A0MS01 117 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 MEX3AA1L020 520 aaKnown RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 SH2D7A6NKC9 451 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 M0R135 149 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ATP5G1P05496 136 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ATP5G3P48201 142 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 HINT1P49773 126 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ATP5G2Q06055 141 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 VMA21Q3ZAQ7 101 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 GLIS1Q8NBF1 620 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 CHCHD1Q96BP2 118 aaKnown RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 MRAP2Q96G30 205 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF799Q96GE5 643 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR8B2Q96RD0 313 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 APOBEC3GQ9HC16 384 aaKnown RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 PRNDQ9UKY0 176 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 RAXQ9Y2V3 346 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 FAM171A2A8MVW0 826 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 A8MWV9 139 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 C17orf105B2RV13 164 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 TTC9CQ8N5M4 171 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR13H1Q8NG92 308 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR10S1Q8NGN2 331 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 KLHDC7BQ96G42 594 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 GAGE12BA1L429 117 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 RAB29O14966 203 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ARPC1AQ92747 370 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 DLX4Q92988 240 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 COL24A1Q17RW2 1714 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 A0A0G2JMM0 328 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1W2PPB8 328 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 KIR3DP1A8MWS1 328 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 TCTN3Q6NUS6 607 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 KCNS1Q96KK3 526 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 NAV2Q8IVL1 2488 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 LGALS4P56470 323 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 GLRX5Q86SX6 157 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 SYT8Q8NBV8 401 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF346Q9UL40 294 aaKnown RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 NDUFS6O75380 124 aaKnown RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 PEX11BO96011 259 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 FBXO45P0C2W1 286 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 CTSCP53634 463 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR8I2Q8N0Y5 310 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 RSPO3Q9BXY4 272 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 MARCH4Q9P2E8 410 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 TCRBV5S2A0A599 114 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 DLEU1O43261 78 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR2A4O95047 310 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 P2RY4P51582 365 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 SIGLEC14Q08ET2 396 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 ATP5L2Q7Z4Y8 100 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 GTF3AQ92664 365 aaKnown RBP4.3□□□□□ -1.72
CSMD3-201ENST00000297405 OR2A7Q96R45 310 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 RAB1BQ9H0U4 201 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 KLK11Q9UBX7 282 aa4.3□□□□□ -1.72
CSMD3-201ENST00000297405 F8W1H4 67 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms