RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SPIN2BQ9BPZ2 258 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 HES4Q9HCC6 221 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 DUXBA0A1W2PPF3 345 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 A6NLC8 198 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 MKRN2OSH3BPM6 223 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 K7EM74 188 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 ST8SIA3O43173 380 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 HAND1O96004 215 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 TIMP3P35625 211 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 MZT1Q08AG7 82 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 KRTCAP3Q53RY4 240 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 TAAR3PQ9P1P4 343 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 OR14J1Q9UGF5 321 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 FZR1Q9UM11 496 aa10.94□□□□□ -0.66
SPTLC1-201ENST00000262554 PIGBOS1A0A0B4J2F0 54 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 LGALS8O00214 317 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 GAPDHP04406 335 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 UCP1P25874 307 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 TIMM23BQ5SRD1 257 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 GPR157Q5UAW9 335 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 C11orf53Q8IXP5 236 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 SELENOHQ8IZQ5 122 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 OR4D5Q8NGN0 318 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 TLNRD1Q9H1K6 362 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 NARFLQ9H6Q4 476 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 TAF9BQ9HBM6 251 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 LUZP4Q9P127 313 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 ERRFI1Q9UJM3 462 aaPredicted RBP10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 WASF3Q9UPY6 502 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 LOC400499M0QZD8 3231 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 H0Y980 276 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 HSPA12AO43301 675 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 PGLYRP1O75594 196 aaPredicted RBP10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 JTBO76095 146 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 P2RY1P47900 373 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 TMEM33P57088 247 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 GNMTQ14749 295 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 RPL7L1Q6DKI1 246 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 Q6ZR03 302 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 ZNF826PQ6ZT77 177 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 ASCL5Q7RTU5 278 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 OR5D13Q8NGL4 314 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 PIGMQ9H3S5 423 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 MSL2Q9HCI7 577 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 ASF1BQ9NVP2 202 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 FBXL17Q9UF56 701 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 WIPI2Q9Y4P8 454 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 POMT1Q9Y6A1 747 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 HEATR1Q9H583 2144 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 SVILO95425 2214 aa10.93□□□□□ -0.66
SPTLC1-201ENST00000262554 TRAV39A0A0B4J263 110 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 GPR137BO60478 399 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 HOXD4P09016 255 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 ZNF83P51522 516 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 ZNF474Q6S9Z5 364 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 ACP7Q6ZNF0 438 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 PRR18Q8N4B5 295 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 RPRMLQ8N4K4 120 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 OR1S2Q8NGQ3 325 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 FAM57AQ8TBR7 257 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 IL22RA2Q969J5 263 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 MARC2Q969Z3 335 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 S100PBPQ96BU1 408 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 MUCL1Q96DR8 90 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 SFXN3Q9BWM7 321 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 MBNL3Q9NUK0 354 aaKnown RBP10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 KCNIP1Q9NZI2 227 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 OR1A1Q9P1Q5 309 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 RCL1Q9Y2P8 373 aaKnown RBP10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 SPEF1Q9Y4P9 236 aa10.92□□□□□ -0.66
SPTLC1-201ENST00000262554 TMEM30CPA0ZSE6 113 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 M0R1B8 84 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 WNT9BO14905 357 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 TNFSF12O43508 249 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 VDAC1P21796 283 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 F2RP25116 425 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 LMO1P25800 156 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 HMGN3Q15651 99 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 C3orf36Q3SXR2 165 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 PRAMEF6Q5VXH4 476 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 WDR82Q6UXN9 313 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 LILRB1Q8NHL6 650 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 GPHA2Q96T91 129 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 UFSP2Q9NUQ7 469 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 PRRC2CQ9Y520 2896 aaKnown RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 ZFHX2Q9C0A1 2572 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 RIF1Q5UIP0 2472 aaKnown RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 BORCS7-ASMTA0A0B4J1R7 106 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 A0A1B0GWJ7 208 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 ZNF705EA8MWA4 302 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 C1QTNF9BB2RNN3 333 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 PROB1E7EW31 1015 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 ADAM20O43506 726 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 SCO1O75880 301 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms