RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 INTS1Q8N201 2190 aaKnown RBP16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 GTF3C1Q12789 2109 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 TMEM210A6NLX4 147 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 DLL1O00548 723 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 IGLV1-44P01699 117 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 CECR9P0C854 216 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 OR8G1Q15617 311 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 BAP18Q8IXM2 172 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 EIF4E3Q8N5X7 224 aaKnown RBP16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 TP53RKQ96S44 253 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 SLC5A7Q9GZV3 580 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 TREM2Q9NZC2 230 aa16.74■□□□□ 0.27
PCDHB11-202ENST00000624887 C3orf85A0A1B0GTC6 90 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 A8MXK9 166 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 KRBOX1C9JBD0 128 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 CDIPTO14735 213 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 FGF2P09038 288 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 GLI4P10075 376 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 MDH2P40926 338 aaKnown RBP16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 SMCO1Q147U7 214 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 PCSK4Q6UW60 755 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 FOXRED2Q8IWF2 684 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF565Q8N9K5 539 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 OR8G5Q8NG78 346 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 SECTM1Q8WVN6 248 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 BARX1Q9HBU1 254 aaPredicted RBP16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 TMEM100Q9NV29 134 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 FBXO9Q9UK97 447 aaPredicted RBP16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 PCDHB10Q9UN67 800 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 WASF3Q9UPY6 502 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 GPR31O00270 319 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 HKR1P10072 659 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF146Q15072 292 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 OR4A4PQ8NGN8 299 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 DNTTIP1Q9H147 329 aa16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 PURGQ9UJV8 347 aaKnown RBP16.73■□□□□ 0.27
PCDHB11-202ENST00000624887 DCHS1Q96JQ0 3298 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 IGKV1D-13A0A0B4J2D9 117 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 H0YL77 283 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 OR2H2O95918 312 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 ACAA1P09110 424 aaPredicted RBP16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 IGKV1-13P0DP09 117 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 RCC1P18754 421 aaPredicted RBP16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 SRPXP78539 464 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 HLA-DRB3P79483 266 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 SHEQ5VZ18 495 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF818PQ6ZRF7 136 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 BEND4Q6ZU67 534 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 BHLHA15Q7RTS1 189 aaPredicted RBP16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 BVESQ8NE79 360 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 TMED3Q9Y3Q3 217 aa16.72■□□□□ 0.27
PCDHB11-202ENST00000624887 OR5H1A6NKK0 313 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 TAAR5O14804 337 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 SPIN3Q5JUX0 258 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 TBC1D26Q86UD7 250 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 RBMXL3Q8N7X1 1067 aaKnown RBP16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 SNIP1Q8TAD8 396 aaKnown RBP16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 CABLES2Q9BTV7 478 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 BCL2L14Q9BZR8 327 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 TMEM222Q9H0R3 208 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 TINAGQ9UJW2 476 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 TEX46H3BTG2 121 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 SLC33A1O00400 549 aaPredicted RBP16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 MLNRO43193 412 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 TSPAN9O75954 239 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 NXPH2O95156 264 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 MBPP02686 304 aaPredicted RBP16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 GRPP07492 148 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 KITLGP21583 273 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 GAPTQ8N292 157 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 FAM169BQ8N8A8 192 aa16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 LSM5Q9Y4Y9 91 aaKnown RBP16.71■□□□□ 0.27
PCDHB11-202ENST00000624887 IGHV1-18A0A0C4DH31 117 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 K7EPK0 472 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 RPL12P30050 165 aaKnown RBP16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 FAM71E2Q8N5Q1 922 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 SLC35G3Q8N808 338 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 TMEM56Q96MV1 263 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 ZFP57Q9NU63 452 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 AMDHD2Q9Y303 409 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 TMEM56-RWDD3S4R434 201 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 SVILO95425 2214 aa16.7■□□□□ 0.26
PCDHB11-202ENST00000624887 IGHV2OR16-5A0A0B4J2B6 119 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 SIRPB1O00241 398 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 SH2D1BO14796 132 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 SCGB1D2O95969 90 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 CRYABP02511 175 aaKnown RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 ATF4P18848 351 aaPredicted RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 MEX3BQ6ZN04 569 aaKnown RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF497Q6ZNH5 498 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 MOB1BQ7L9L4 216 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 C1orf174Q8IYL3 243 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 OR10J5Q8NHC4 309 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 LINC00052Q96N35 136 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 HES4Q9HCC6 221 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 FAM215AQ9Y5M1 114 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 SLC25A15Q9Y619 301 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms