RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 WDR13Q9H1Z4 485 aa17.25■□□□□ 0.35
SDHA-220ENST00000617470 DYNLRB1Q9NP97 96 aa17.25■□□□□ 0.35
SDHA-220ENST00000617470 LAMP3Q9UQV4 416 aa17.25■□□□□ 0.35
SDHA-220ENST00000617470 POLDIP2Q9Y2S7 368 aa17.25■□□□□ 0.35
SDHA-220ENST00000617470 LRBAP50851 2863 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 PTPN13Q12923 2485 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 DUS4LO95620 317 aaKnown RBP17.24■□□□□ 0.35
SDHA-220ENST00000617470 RPS2P15880 293 aaKnown RBP17.24■□□□□ 0.35
SDHA-220ENST00000617470 VAMP1P23763 118 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 SURF2Q15527 256 aaPredicted RBP17.24■□□□□ 0.35
SDHA-220ENST00000617470 LGALSLQ3ZCW2 172 aaPredicted RBP17.24■□□□□ 0.35
SDHA-220ENST00000617470 Q6ZS49 121 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 GTF3AQ92664 365 aaKnown RBP17.24■□□□□ 0.35
SDHA-220ENST00000617470 PLEKHF2Q9H8W4 249 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 MCRIP1C9JLW8 97 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 SOD3P08294 240 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 EFNB3Q15768 340 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 ASCC1Q8N9N2 400 aaKnown RBP17.24■□□□□ 0.35
SDHA-220ENST00000617470 CASTOR1Q8WTX7 329 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 SCGB3A2Q96PL1 93 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 TLNRD1Q9H1K6 362 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 CXXC4Q9H2H0 198 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 Q9N2K0 584 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 SLC23A1Q9UHI7 598 aa17.24■□□□□ 0.35
SDHA-220ENST00000617470 M0R233 179 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 ACAA1P09110 424 aaPredicted RBP17.23■□□□□ 0.35
SDHA-220ENST00000617470 HLA-GP17693 338 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 MST1LQ2TV78 715 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 ZNF826PQ6ZT77 177 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 Q8IYB0 196 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 OR5M8Q8NGP6 311 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 RDH5Q92781 318 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 SPACA1Q9HBV2 294 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 CBLN4Q9NTU7 201 aa17.23■□□□□ 0.35
SDHA-220ENST00000617470 DBX1A6NMT0 343 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 HOXA4Q00056 320 aaPredicted RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 SRSF7Q16629 238 aaKnown RBP eCLIP17.22■□□□□ 0.35
SDHA-220ENST00000617470 C11orf88Q6PI97 169 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 C20orf204Q6ZNR8 217 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 DPCDQ9BVM2 203 aaPredicted RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 HES4Q9HCC6 221 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 CHMP1AQ9HD42 196 aaPredicted RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 CCSO14618 274 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 SPRY3O43610 288 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 NOS1APO75052 506 aaPredicted RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 SFT2D2O95562 160 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 DANCRP0C864 163 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 ZNF81P51508 661 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 SRSF4Q08170 494 aaKnown RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 SWI5Q1ZZU3 235 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 IGSF11Q5DX21 431 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 PRAMEF6Q5VXH4 476 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 ZCCHC24Q8N2G6 241 aaKnown RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 POC1AQ8NBT0 407 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 OR2Z1Q8NG97 314 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 MRPL30Q8TCC3 161 aaKnown RBP17.22■□□□□ 0.35
SDHA-220ENST00000617470 PHB2Q99623 299 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 FXYD6Q9H0Q3 95 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 SLA2Q9H6Q3 261 aa17.22■□□□□ 0.35
SDHA-220ENST00000617470 ZSCAN5BA6NJL1 495 aa17.21■□□□□ 0.35
SDHA-220ENST00000617470 GMFBP60983 142 aa17.21■□□□□ 0.35
SDHA-220ENST00000617470 ZNF146Q15072 292 aa17.21■□□□□ 0.35
SDHA-220ENST00000617470 GON7Q9BXV9 100 aa17.21■□□□□ 0.35
SDHA-220ENST00000617470 PRR13Q9NZ81 148 aa17.21■□□□□ 0.35
SDHA-220ENST00000617470 CENPEQ02224 2701 aa17.21■□□□□ 0.35
SDHA-220ENST00000617470 DEGS1O15121 323 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 CD8AP01732 235 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 GLAP06280 429 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 PGAM2P15259 253 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 FCGR2CP31995 323 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 RBMXP38159 391 aaKnown RBP17.2■□□□□ 0.34
SDHA-220ENST00000617470 NEK7Q8TDX7 302 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 VRK1Q99986 396 aaPredicted RBP17.2■□□□□ 0.34
SDHA-220ENST00000617470 CELSR2Q9HCU4 2923 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 WNT9BO14905 357 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 NXPH2O95156 264 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 OR2H2O95918 312 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 CTSDP07339 412 aaPredicted RBP17.2■□□□□ 0.34
SDHA-220ENST00000617470 SCTP09683 121 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 ECI1P42126 302 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 HERPUD1Q15011 391 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 SLC9A3R2Q15599 337 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 ANKRD55Q3KP44 614 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 WDR82Q6UXN9 313 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 DTX2Q86UW9 622 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 ASB13Q8WXK3 278 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 NRGNQ92686 78 aa17.2■□□□□ 0.34
SDHA-220ENST00000617470 TRBV6-6A0A0A6YYG2 114 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 SLC33A1O00400 549 aaPredicted RBP17.19■□□□□ 0.34
SDHA-220ENST00000617470 RGS11O94810 467 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 ZNF44P15621 663 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 ZNF880Q6PDB4 577 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 KCTD9Q7L273 389 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 SPERTQ8NA61 448 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 ELMOD3Q96FG2 381 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 MS4A5Q9H3V2 200 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 HEXA-AS1Q9H8Q6 139 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 TRAV14DV4A0A0A6YYC5 116 aa17.19■□□□□ 0.34
SDHA-220ENST00000617470 SIRPB1O00241 398 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms