RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 LOC389332A0A1B0GUA5 103 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 TMEM72A0PK05 275 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 SLC31A1O15431 190 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 RBFOX2O43251 390 aaKnown RBP eCLIP3.47□□□□□ -1.85
LINC00458-206ENST00000607494 FGF16O43320 207 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 SCO1O75880 301 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 PRB2P02812 416 aaPredicted RBP3.47□□□□□ -1.85
LINC00458-206ENST00000607494 ZNF806P0C7X5 589 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 ACOT2P49753 483 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 CCL23P55773 120 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 DLX6P56179 175 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 PRDX1Q06830 199 aaKnown RBP3.47□□□□□ -1.85
LINC00458-206ENST00000607494 BNIP2Q12982 314 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 MED21Q13503 144 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 ZNF404Q494X3 552 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 CDKL4Q5MAI5 379 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 Q5W150 140 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 AP1ARQ63HQ0 302 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 KCTD16Q68DU8 428 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 MED27Q6P2C8 311 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 ZFP1Q6P2D0 407 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 Q6ZR03 302 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 TPGS1Q6ZTW0 290 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 FAM231DQ6ZW35 169 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 OR10G2Q8NGC3 310 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 LINC01560Q8TB33 94 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 DNAJB3Q8WWF6 145 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 CCL17Q92583 94 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 FMC1Q96HJ9 113 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 TBL1YQ9BQ87 522 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 TAPBPLQ9BX59 468 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 PARP11Q9NR21 331 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 COMMD9Q9P000 198 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 ENOPH1Q9UHY7 261 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 NAGKQ9UJ70 344 aa3.47□□□□□ -1.85
LINC00458-206ENST00000607494 CPSF1Q10570 1443 aaKnown RBP3.46□□□□□ -1.86
LINC00458-206ENST00000607494 ABCC6O95255 1503 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 TRPM1Q7Z4N2 1603 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 LOC102724200A0A096LPH7 203 aaPredicted RBP3.46□□□□□ -1.86
LINC00458-206ENST00000607494 GOLGA8KD6RF30 607 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 FTCDNL1E5RQL4 147 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 GOLGA8MH3BSY2 632 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 I3L4J1 428 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 ENTPD6O75354 484 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 VAMP5O95183 116 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 CTDNEP1O95476 244 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 M6PRP20645 277 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 CDC34P49427 236 aaPredicted RBP3.46□□□□□ -1.86
LINC00458-206ENST00000607494 ZNF684Q5T5D7 378 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 FAM45BPQ6NSW5 357 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 PRNTQ86SH4 94 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 OR5L1Q8NGL2 311 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 CPNE4Q96A23 557 aaPredicted RBP3.46□□□□□ -1.86
LINC00458-206ENST00000607494 RBMXL1Q96E39 390 aaKnown RBP3.46□□□□□ -1.86
LINC00458-206ENST00000607494 FAAP24Q9BTP7 215 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 API5Q9BZZ5 524 aaKnown RBP3.46□□□□□ -1.86
LINC00458-206ENST00000607494 POMKQ9H5K3 350 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 RHOFQ9HBH0 211 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 CA10Q9NS85 328 aa3.46□□□□□ -1.86
LINC00458-206ENST00000607494 IGSF9BQ9UPX0 1349 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 PPIP5K1Q6PFW1 1433 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 NFAT5O94916 1531 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 UTRNP46939 3433 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 PGPA6NDG6 321 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 FFAR1O14842 300 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 CYTH3O43739 400 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
LINC00458-206ENST00000607494 OR2A4O95047 310 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 HLA-DQB1P01920 261 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 CD74P04233 296 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 ADRA2AP08913 450 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 MRPL3P09001 348 aaKnown RBP3.45□□□□□ -1.86
LINC00458-206ENST00000607494 SLC2A1P11166 492 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 IL1RNP18510 177 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 MAGP20916 626 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 DMC1Q14565 340 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 LINC00303Q3SY05 128 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 NANOGP8Q6NSW7 305 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 SAXO1Q8IYX7 474 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 ORMDL3Q8N138 153 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 DNAAF3Q8N9W5 541 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 ZNF461Q8TAF7 563 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 ZNF420Q8TAQ5 688 aaPredicted RBP3.45□□□□□ -1.86
LINC00458-206ENST00000607494 SLC25A46Q96AG3 418 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 OR2A7Q96R45 310 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 POTEKPQ9BYX7 375 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 TSGA10Q9BZW7 698 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 SLC25A31Q9H0C2 315 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 PLEKHJ1Q9NW61 149 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 C21orf62Q9NYP8 219 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
LINC00458-206ENST00000607494 BRD4O60885 1362 aaPredicted RBP3.45□□□□□ -1.86
LINC00458-206ENST00000607494 LY75O60449 1722 aa3.44□□□□□ -1.86
LINC00458-206ENST00000607494 WDR90Q96KV7 1748 aa3.44□□□□□ -1.86
LINC00458-206ENST00000607494 QRICH2Q9H0J4 1663 aa3.44□□□□□ -1.86
LINC00458-206ENST00000607494 CENPVL3A0A0U1RRI6 287 aa3.44□□□□□ -1.86
LINC00458-206ENST00000607494 EFCAB9A8MZ26 197 aa3.44□□□□□ -1.86
LINC00458-206ENST00000607494 F5H5K5 113 aa3.44□□□□□ -1.86
LINC00458-206ENST00000607494 PHYHO14832 338 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms