RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GAPDHP04406 335 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 GLP1RP43220 463 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 TEX38Q6PEX7 206 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 C10orf99Q6UWK7 81 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 DRAM1Q8N682 238 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 OR10X1Q8NGY0 326 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 OR56B4Q8NH76 319 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 C4orf36Q96KX1 117 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 FAM118AQ9NWS6 357 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 KIF25Q9UIL4 384 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 DHDHQ9UQ10 334 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 A0A1W2PPI3 338 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 ALPLP05186 524 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 RAB3AP20336 220 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 HOXD3P31249 432 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 SLC35E3Q7Z769 313 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 ZNF329Q86UD4 541 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 ZNF695Q8IW36 515 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 C8orf31Q8N9H6 132 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 OR52M1Q8NGK5 317 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 OR10AC1Q8NH08 325 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 OR5AK2Q8NH90 309 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 P2RX4Q99571 388 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 JAM3Q9BX67 310 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 PPIL3Q9H2H8 161 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 IFT22Q9H7X7 185 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 PAK1IP1Q9NWT1 392 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 ING3Q9NXR8 418 aa14.09□□□□□ -0.15
SHKBP1-227ENST00000602011 TRAV24A0A0B4J272 114 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 SH2D7A6NKC9 451 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 NUDT19A8MXV4 375 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 AP4M1O00189 453 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 CIB2O75838 187 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 GBX2P52951 348 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 DGCR2P98153 550 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 ZNF816Q0VGE8 651 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 RSU1Q15404 277 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 Q3ZCU0 254 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 KLHL22Q53GT1 634 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 NHLRC3Q5JS37 347 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 RSBN1Q5VWQ0 802 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 ASCL4Q6XD76 172 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 ETV3LQ6ZN32 361 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 LINC00596Q86U02 117 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 TGIF2LXQ8IUE1 241 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 C10orf67Q8IYJ2 551 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 OR8H1Q8NGG4 311 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 OR13A1Q8NGR1 328 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 NR1H4Q96RI1 486 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 GPER1Q99527 375 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 ALG8Q9BVK2 526 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 RAB9BQ9NP90 201 aa14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 SIRT4Q9Y6E7 314 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-227ENST00000602011 H0YHG0 523 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 ZNF780AO75290 641 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 ZFPL1O95159 310 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 CD2P06729 351 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 GABPB1Q06547 395 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 RAB40BQ12829 278 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 PNLIPRP3Q17RR3 467 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 ZNF529Q6P280 563 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 STPG2Q8N412 459 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 LINC00311Q8N616 119 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 OR2T10Q8NGZ9 312 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 LGALS12Q96DT0 336 aa14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 LIN7CQ9NUP9 197 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 CHCHD3Q9NX63 227 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-227ENST00000602011 SAC3D1A6NKF1 404 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 IL3RAP26951 378 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 ALDH3A2P51648 485 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 C8orf86Q6ZUL3 223 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 RNF144BQ7Z419 303 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 LHFPL3Q86UP9 236 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 KLHL30-AS1Q8NEE0 82 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 TNFAIP8L1Q8WVP5 186 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 TSEN15Q8WW01 171 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 CHCHD6Q9BRQ6 235 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 ABCG5Q9H222 651 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 IL36GQ9NZH8 169 aa14.06□□□□□ -0.16
SHKBP1-227ENST00000602011 HSD17B6O14756 317 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 RRP9O43818 475 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 ORC5O43913 435 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 ELANEP08246 267 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 CD1BP29016 333 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 CDX1P47902 265 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 HNF4GQ14541 408 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 KIR2DS1Q14954 304 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 TMEM30BQ3MIR4 351 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 CCDC58Q4VC31 144 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 CXorf66Q5JRM2 361 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 SATL1Q86VE3 508 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 IZUMO1Q8IYV9 350 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 OR8U1Q8NH10 309 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 RFESDQ8TAC1 157 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 MRGPRDQ8TDS7 321 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 GPR148Q8TDV2 347 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 NOL4LQ96MY1 436 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 S100A13Q99584 98 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms