RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 YIPF6Q96EC8 236 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 MALSU1Q96EH3 234 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 S100A13Q99584 98 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 FAM192AQ9GZU8 254 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 TXNL4BQ9NX01 149 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 STAB2Q8WWQ8 2551 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 A0A1W2PPH5 198 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 PDCD5O14737 125 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 SYNGR1O43759 233 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 AIREO43918 545 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 PEX14O75381 377 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 TFAP2AP05549 437 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 FGF9P31371 208 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 VDAC2P45880 294 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 IL24Q13007 206 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 PDZK1IP1Q13113 114 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 ZNF561Q8N587 486 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 FOXRED1Q96CU9 486 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 PPIL3Q9H2H8 161 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 ABCB10Q9NRK6 738 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 PITPNC1Q9UKF7 332 aa13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 TBL2Q9Y4P3 447 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-215ENST00000597649 hCG_1809904A0A1W2PP81 198 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 A0A1W2PPE2 198 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 A0A1W2PR64 198 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 A0A1W2PRV1 198 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 TK1P04183 234 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 PGA5P0DJD9 388 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 MPZP25189 248 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 ALDH3B2P48448 385 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 DYNLT3P51808 116 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 ZNF626Q68DY1 528 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 LRRTM1Q86UE6 522 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 CDH26Q8IXH8 852 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 OR11H6Q8NGC7 330 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 SLAMF9Q96A28 289 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 CEP19Q96LK0 163 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 KCTD7Q96MP8 289 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 WWC2-AS2Q96NR7 200 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 FUNDC2Q9BWH2 189 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 ING4Q9UNL4 249 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 SACSQ9NZJ4 4579 aa13.17□□□□□ -0.3
SHKBP1-215ENST00000597649 TRAV1-2A0A0B4J238 106 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 FAM90A22PA8MWA6 464 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 NXPH2O95156 264 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 PF4V1P10720 104 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 PSMD7P51665 324 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 SMIM21Q3B7S5 101 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 SAXO1Q8IYX7 474 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 AK6Q9Y3D8 172 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 HILPDAQ9Y5L2 63 aa13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 EPPK1P58107 5090 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-215ENST00000597649 TCRBV4S1A1TA0A5B7 111 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 NOS1APO75052 506 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 PTGFRP43088 359 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 OR3A4PP47883 348 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 LSM3P62310 102 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 RSU1Q15404 277 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 ARSJQ5FYB0 599 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 GPR107Q5VW38 600 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 RNF144BQ7Z419 303 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 Q8IYB0 196 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 OR13D1Q8NGV5 346 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 NRIP2Q9BQI9 281 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 UQCC2Q9BRT2 126 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 METTL9Q9H1A3 318 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 PCDHB16Q9NRJ7 776 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 MTCH1Q9NZJ7 389 aa13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 MRPS28Q9Y2Q9 187 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-215ENST00000597649 K7N7A8 449 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 IGHV1-8P0DP01 117 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 RAB3BP20337 219 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 RANBP1P43487 201 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 MTNR1BP49286 362 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 ZP1P60852 638 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 CD69Q07108 199 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 DYNC1I2Q13409 638 aaKnown RBP13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 AWAT2Q6E213 333 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 TPRA1Q86W33 373 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 PXT1Q8NFP0 134 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 EMG1Q92979 244 aaKnown RBP13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 B9D2Q9BPU9 175 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 HES4Q9HCC6 221 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 TSSC4Q9Y5U2 329 aaPredicted RBP13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 V9GY05 133 aa13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 HUWE1Q7Z6Z7 4374 aaKnown RBP13.14□□□□□ -0.31
SHKBP1-215ENST00000597649 F2RL2O00254 374 aa13.13□□□□□ -0.31
SHKBP1-215ENST00000597649 NOL3O60936 208 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms