RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 TRAV24A0A0B4J272 114 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 WI2-2373I1.2A0A1W2PRP0 233 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 J3QR06 171 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 CD2P06729 351 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 SNRNP70P08621 437 aaKnown RBP12.91□□□□□ -0.34
MBD3-206ENST00000589901 HOXD3P31249 432 aaPredicted RBP12.91□□□□□ -0.34
MBD3-206ENST00000589901 MTNR1BP49286 362 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 DIAPH2-AS1Q14236 149 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 LTC4SQ16873 150 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
MBD3-206ENST00000589901 C8orf59Q8N0T1 100 aaPredicted RBP12.91□□□□□ -0.34
MBD3-206ENST00000589901 LINC00482Q8N8I6 264 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 CNIH3Q8TBE1 160 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 ZNF649Q9BS31 505 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
MBD3-206ENST00000589901 EXOSC1Q9Y3B2 195 aaKnown RBP12.91□□□□□ -0.34
MBD3-206ENST00000589901 DNAH9Q9NYC9 4486 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 A0A1W2PPI3 338 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 CLIC3O95833 236 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 HNF4GQ14541 408 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 ELP2Q6IA86 826 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 MRPL41Q8IXM3 137 aaKnown RBP12.9□□□□□ -0.34
MBD3-206ENST00000589901 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 OR10K1Q8NGX5 313 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 RFESDQ8TAC1 157 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 PLPPR1Q8TBJ4 325 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 MRGPRDQ8TDS7 321 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 NOL4LQ96MY1 436 aaPredicted RBP12.9□□□□□ -0.34
MBD3-206ENST00000589901 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
MBD3-206ENST00000589901 IDI2-AS1Q9NZ38 188 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 ZNF581Q9P0T4 197 aa12.9□□□□□ -0.34
MBD3-206ENST00000589901 AMMECR1Q9Y4X0 333 aaPredicted RBP12.9□□□□□ -0.34
MBD3-206ENST00000589901 TRAV39A0A0B4J263 110 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 GABRPO00591 440 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 DUS4LO95620 317 aaKnown RBP12.89□□□□□ -0.35
MBD3-206ENST00000589901 IL1AP01583 271 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 C21orf33P30042 268 aaPredicted RBP12.89□□□□□ -0.35
MBD3-206ENST00000589901 CAPGP40121 348 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 GNG10P50151 68 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 GABPB1Q06547 395 aaPredicted RBP12.89□□□□□ -0.35
MBD3-206ENST00000589901 HES1Q14469 280 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 CCDC58Q4VC31 144 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 VAX1Q5SQQ9 334 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 RSBN1Q5VWQ0 802 aaPredicted RBP12.89□□□□□ -0.35
MBD3-206ENST00000589901 C11orf87Q6NUJ2 197 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 RPL22L1Q6P5R6 122 aaKnown RBP12.89□□□□□ -0.35
MBD3-206ENST00000589901 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 SATL1Q86VE3 508 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 C5orf56Q8N8D9 126 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 PXT1Q8NFP0 134 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 TNFAIP8L1Q8WVP5 186 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 APH1BQ8WW43 257 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 TMEM80Q96HE8 168 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 JAM3Q9BX67 310 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 LINC00574Q9H8X3 128 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
MBD3-206ENST00000589901 TENM3Q9P273 2699 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 EFCAB10A6NFE3 127 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 TMEM11P17152 192 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 RAB3AP20336 220 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 SSTR5P35346 364 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 SOX2P48431 317 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 RPL23AP62750 156 aaKnown RBP12.88□□□□□ -0.35
MBD3-206ENST00000589901 EGFEM1PQ0D2K5 195 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 MADCAM1Q13477 382 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 IL13RA2Q14627 380 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 ZNF529Q6P280 563 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 RGP1Q92546 391 aaPredicted RBP12.88□□□□□ -0.35
MBD3-206ENST00000589901 GPER1Q99527 375 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 VCX3BQ9H321 246 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
MBD3-206ENST00000589901 ANKRD65E5RJM6 399 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 WBP4O75554 376 aaKnown RBP12.87□□□□□ -0.35
MBD3-206ENST00000589901 IGKV1D-33P01593 117 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 IGKV1-33P01594 117 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 THBS3P49746 956 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 GTF2A1P52655 376 aaPredicted RBP12.87□□□□□ -0.35
MBD3-206ENST00000589901 PPP3R1P63098 170 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 RSU1Q15404 277 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 SMN1Q16637 294 aaKnown RBP12.87□□□□□ -0.35
MBD3-206ENST00000589901 OGFRL1Q5TC84 451 aaPredicted RBP12.87□□□□□ -0.35
MBD3-206ENST00000589901 C8orf86Q6ZUL3 223 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 TAS2R4Q9NYW5 299 aa12.87□□□□□ -0.35
MBD3-206ENST00000589901 DIMT1Q9UNQ2 313 aaKnown RBP12.87□□□□□ -0.35
MBD3-206ENST00000589901 SERPINE3A8MV23 424 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms