RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 NBASA2RRP1 2371 aa4.92□□□□□ -1.62
SDF2-206ENST00000587788 HCFC1P51610 2035 aa4.92□□□□□ -1.62
SDF2-206ENST00000587788 DOPEY2Q9Y3R5 2298 aa4.92□□□□□ -1.62
SDF2-206ENST00000587788 SPTA1P02549 2419 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 IGKV1-27A0A075B6S5 117 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 KIR2DS1A0A191URI9 304 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 C5orf49A4QMS7 147 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 ANKRD30BLA7E2S9 258 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 TRAPPC2LH3BP13 241 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 H7C1Q1 480 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SDCBPO00560 298 aaPredicted RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 CCSO14618 274 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SPRY1O43609 319 aaPredicted RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 ANGPTL7O43827 346 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 KNG1P01042 644 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 PATE4P0C8F1 98 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 RPS2P15880 293 aaKnown RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 ANOS1P23352 680 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 APLNRP35414 380 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 KIR2DS4P43632 304 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 LUMP51884 338 aaPredicted RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 FGF12P61328 243 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 HERV-K104P61576 105 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 RAB1AP62820 205 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 HGFACQ04756 655 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 PRDX4Q13162 271 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 IL15RAQ13261 267 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SNTB1Q13884 538 aaKnown RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 RBM39Q14498 530 aaKnown RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 KIR2DS1Q14954 304 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 P2RY6Q15077 328 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SLC9A3R2Q15599 337 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 ANKRD55Q3KP44 614 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 LRRC37A5PQ49AS3 106 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 ZNF585AQ6P3V2 769 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 UNQ6126/PRO20091Q6UXV3 157 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 TFAP2EQ6VUC0 442 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SSX8Q7RTT4 187 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 NUFIP2Q7Z417 695 aaKnown RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 BAP18Q8IXM2 172 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 Q8IYB0 196 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 ZNF611Q8N823 705 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 POC1AQ8NBT0 407 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 ST6GALNAC3Q8NDV1 305 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 CPEB3Q8NE35 698 aaKnown RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 OR10AD1Q8NGE0 317 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 OR1S1Q8NH92 325 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 FGFBP3Q8TAT2 258 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 FAM57AQ8TBR7 257 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SAT2Q96F10 170 aaPredicted RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 POM121L2Q96KW2 1035 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 SULT4A1Q9BR01 284 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 RNF126Q9BV68 326 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 PAPOLGQ9BWT3 736 aaKnown RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 ZNF442Q9H7R0 627 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 CLCF1Q9UBD9 225 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 ZNF629Q9UEG4 869 aaPredicted RBP4.91□□□□□ -1.62
SDF2-206ENST00000587788 STARD10Q9Y365 291 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 MYO7BQ6PIF6 2116 aa4.91□□□□□ -1.62
SDF2-206ENST00000587788 HELZ2Q9BYK8 2649 aaKnown RBP4.9□□□□□ -1.62
SDF2-206ENST00000587788 MED12Q93074 2177 aa4.9□□□□□ -1.62
SDF2-206ENST00000587788 TRBV6-6A0A0A6YYG2 114 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 IGKV1-12A0A0C4DH73 117 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 DUXBA0A1W2PPF3 345 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 LRP5LA4QPB2 252 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 MBD3L4A6NDZ8 208 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 MBD3L3A6NE82 208 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 MBD3L5A6NJ08 208 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 E5RGE8 158 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 GEMIN2O14893 280 aaKnown RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 BET1O15155 118 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 FGF16O43320 207 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 JTBO76095 146 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 DIRAS3O95661 229 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 IL18BPO95998 194 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 IGKV1D-12P01611 117 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 HLA-HP01893 362 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 TK1P04183 234 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 GAPDHP04406 335 aaKnown RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 CD79AP11912 226 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 SELEP16581 610 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 CD40P25942 277 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 S100GP29377 79 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 OPRM1P35372 400 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 CASP6P55212 293 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 PIGPP57054 158 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 RND3P61587 244 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 GNG3P63215 75 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 IL13RA2Q14627 380 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 ATXN7L3Q14CW9 347 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 IAH1Q2TAA2 248 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 GPR157Q5UAW9 335 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 Q6ZT83 130 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 SLC25A26Q70HW3 274 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 C1orf174Q8IYL3 243 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 LGI3Q8N145 548 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 OR56B2PQ8NGI1 322 aa4.9□□□□□ -1.63
SDF2-206ENST00000587788 MBD3L2Q8NHZ7 208 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 RTN4IP1Q8WWV3 396 aaPredicted RBP4.9□□□□□ -1.63
SDF2-206ENST00000587788 BCL2L2Q92843 193 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 273.6 ms