RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 HSP90AA4PQ58FG1 418 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 CLEC20AQ6ZU45 233 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 FAM19A3Q7Z5A8 133 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 OR2AE1Q8NHA4 323 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 DDIT4LQ96D03 193 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 APOL4Q9BPW4 351 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 COPS4Q9BT78 406 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 SYT4Q9H2B2 425 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 FBXL15Q9H469 300 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 POMPQ9Y244 141 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 TBL2Q9Y4P3 447 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 COL4A2P08572 1712 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 CRB1P82279 1406 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 COL18A1P39060 1754 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 IGSF23A1L1A6 192 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 ARGFXA6NJG6 315 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 SLC25A20O43772 301 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 S1PR2O95136 353 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 SOX14O95416 240 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 SPIN4Q56A73 249 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 SLC25A25Q6KCM7 469 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 FAHD1Q6P587 224 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 SSX7Q7RTT5 188 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 PID1Q7Z2X4 250 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 NIT1Q86X76 327 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 ASCC1Q8N9N2 400 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 OR8G5Q8NG78 346 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 PDCD6IPQ8WUM4 868 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 CDKL2Q92772 493 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 ZMYND19Q96E35 227 aaPredicted RBP1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 POTEKPQ9BYX7 375 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 ALX4Q9H161 411 aaPredicted RBP1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 TDRD3Q9H7E2 651 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 OR51B4Q9Y5P0 310 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 ATG2BQ96BY7 2078 aa1.31□□□□□ -2.2
SMCHD1-207ENST00000581711 IGKV1-12A0A0C4DH73 117 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 KNCNA6PVL3 124 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 LY6LH3BQJ8 138 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 PDCD6O75340 191 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 IGKV1D-12P01611 117 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 SLC2A1P11166 492 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 TTPAP49638 278 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 HBG1P69891 147 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 HBG2P69892 147 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 TSPAN31Q12999 210 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 SS18Q15532 418 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 FAM229BQ4G0N7 80 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 ACSBG2Q5FVE4 666 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF767PQ75MW2 155 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 TMEM25Q86YD3 366 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 RBM45Q8IUH3 476 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 SYS1Q8N2H4 156 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 OR4C16Q8NGL9 310 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 OR13C9Q8NGT0 318 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 OR6K2Q8NGY2 324 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF625Q96I27 306 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF251Q9BRH9 671 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 SUCNR1Q9BXA5 334 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 VCX3AQ9NNX9 186 aa1.3□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF638Q14966 1978 aaKnown RBP1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF860A6NHJ4 632 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 CPMP14384 443 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 CPN2P22792 545 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 TSPOP30536 169 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 RANBP1P43487 201 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 GABRA4P48169 554 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 RHOAP61586 193 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 PRDX1Q06830 199 aaKnown RBP1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 OLIG3Q7RTU3 272 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 SLC25A45Q8N413 288 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 SPICQ8N5J4 248 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 SPPL2BQ8TCT7 592 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 CASTOR1Q8WTX7 329 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 CIB1Q99828 191 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 RMND1Q9NWS8 449 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 AMMECR1Q9Y4X0 333 aaPredicted RBP1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 MINOS1-NBL1R4GNA1 71 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 ARAP3Q8WWN8 1544 aa1.29□□□□□ -2.2
SMCHD1-207ENST00000581711 A0A0J9YX75 114 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 VPS37CA5D8V6 355 aaPredicted RBP1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 ERICH4A6NGS2 130 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 FNDC10F2Z333 226 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 TRAPPC3O43617 180 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 VAPBO95292 243 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 GIMD1P0DJR0 217 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF7P17097 686 aaPredicted RBP1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 RAB2AP61019 212 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 DEFA6Q01524 100 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 BAXQ07812 192 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 OR8G1Q15617 311 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 NKAIN1Q4KMZ8 207 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 HES3Q5TGS1 186 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 GPR119Q8TDV5 335 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 CAPZA3Q96KX2 299 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 PITX2Q99697 317 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 FAM206AQ9NX38 181 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 SLIT2O94813 1529 aa1.28□□□□□ -2.2
SMCHD1-207ENST00000581711 A0A1W2PQL4 384 aaPredicted RBP1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 MGAT4DA6NG13 374 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms