RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 LDLRAD3Q86YD5 345 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 Q8NA96 180 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 CHD3Q12873 2000 aaKnown RBP16.17■□□□□ 0.18
SMPD3-203ENST00000563226 RP1L1Q8IWN7 2480 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-203ENST00000563226 CEACAM8P31997 349 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-203ENST00000563226 FAM74A1Q5RGS3 127 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 MBNL2Q5VZF2 373 aaKnown RBP16.17■□□□□ 0.18
SMPD3-203ENST00000563226 FAM169BQ8N8A8 192 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 C18orf12Q96KH6 178 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 SYT3Q9BQG1 590 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 SUCNR1Q9BXA5 334 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 CXXC4Q9H2H0 198 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 CADP27708 2225 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 PIEZO2Q9H5I5 2752 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 ZGRF1Q86YA3 2104 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 M0R1B8 84 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 GCH1P30793 250 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 TDGF1P3P51864 188 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 EIF2S3LQ2VIR3 472 aaKnown RBP16.16■□□□□ 0.18
SMPD3-203ENST00000563226 TIMM23BQ5SRD1 257 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 CISD2Q8N5K1 135 aaKnown RBP16.16■□□□□ 0.18
SMPD3-203ENST00000563226 LRTM2Q8N967 370 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 CCDC71LQ8N9Z2 235 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 ARPC5LQ9BPX5 153 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 HES4Q9HCC6 221 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 OR14J1Q9UGF5 321 aa16.16■□□□□ 0.18
SMPD3-203ENST00000563226 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.15■□□□□ 0.18
SMPD3-203ENST00000563226 F5H0A9 414 aaPredicted RBP16.15■□□□□ 0.18
SMPD3-203ENST00000563226 MPPED1O15442 326 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 IFNA21P01568 189 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 TFF1P04155 84 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 TBR1Q16650 682 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 TOR2AQ5JU69 321 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 SPIN3Q5JUX0 258 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 RGS7BPQ6MZT1 257 aaPredicted RBP16.15■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF497Q6ZNH5 498 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 LRP11Q86VZ4 500 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 GAPTQ8N292 157 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 KIRREL1Q96J84 757 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 SLC5A7Q9GZV3 580 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 UFSP2Q9NUQ7 469 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 TUBD1Q9UJT1 453 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 MEMO1Q9Y316 297 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 A6NLC8 198 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 HSD17B6O14756 317 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 MEX3BQ6ZN04 569 aaKnown RBP16.15■□□□□ 0.18
SMPD3-203ENST00000563226 TBC1D26Q86UD7 250 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 UBALD1Q8TB05 177 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 CNTNAP3BQ96NU0 1288 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 SFXN3Q9BWM7 321 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 CNTNAP3Q9BZ76 1288 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 CCL28Q9NRJ3 127 aa16.15■□□□□ 0.18
SMPD3-203ENST00000563226 MAP1BP46821 2468 aaKnown RBP16.15■□□□□ 0.18
SMPD3-203ENST00000563226 C3orf85A0A1B0GTC6 90 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 TEX46H3BTG2 121 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 HAND1O96004 215 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 CTXN2P0C2S0 81 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 TUBG1P23258 451 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 AANATQ16613 207 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 WDR82Q6UXN9 313 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 C22orf34Q6ZV56 151 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 ZNF565Q8N9K5 539 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 OR4A4PQ8NGN8 299 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 CABLES2Q9BTV7 478 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 TLNRD1Q9H1K6 362 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 TUBG2Q9NRH3 451 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 OR1A1Q9P1Q5 309 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 H7C1Q1 480 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 SH2D1BO14796 132 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 PSPNO60542 156 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 BMP5P22003 454 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 MDH2P40926 338 aaKnown RBP16.14■□□□□ 0.17
SMPD3-203ENST00000563226 LGI3Q8N145 548 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 IL1F10Q8WWZ1 152 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 AQP10Q96PS8 301 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 REG4Q9BYZ8 158 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 CYTL1Q9NRR1 136 aa16.14■□□□□ 0.17
SMPD3-203ENST00000563226 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 GPR31O00270 319 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 SCGB1D2O95969 90 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 ACAA1P09110 424 aaPredicted RBP16.13■□□□□ 0.17
SMPD3-203ENST00000563226 FAM27E3Q08E93 113 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 DOLPP1Q86YN1 238 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 PRR18Q8N4B5 295 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 SLC35G3Q8N808 338 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 USB1Q9BQ65 265 aaKnown RBP16.13■□□□□ 0.17
SMPD3-203ENST00000563226 SLX1AQ9BQ83 275 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 TREM2Q9NZC2 230 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 PCDHB10Q9UN67 800 aa16.13■□□□□ 0.17
SMPD3-203ENST00000563226 LSM5Q9Y4Y9 91 aaKnown RBP16.13■□□□□ 0.17
SMPD3-203ENST00000563226 C1QTNF9BB2RNN3 333 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 K7ENP7 123 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 PET100P0DJ07 73 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 RND3P61587 244 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 NHLH1Q02575 133 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 SHEQ5VZ18 495 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 H1FOOQ8IZA3 346 aaPredicted RBP16.12■□□□□ 0.17
SMPD3-203ENST00000563226 DUSP13Q9UII6 198 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 hCG_1807616A0A1W2PRN6 198 aa16.12■□□□□ 0.17
SMPD3-203ENST00000563226 I3L521 148 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms